Evidence map›Paper›PMID 31632095›Full record

ArticleInfection and drug resistance2019

Molecular characterization and prevalence of antibiotic resistance in

Alfizah Hanafiah, Hasyanee Binmaeil, Raja Affendi Raja Ali, Isa Mohamed Rose, Bruno S Lopes

Open access · goldAbstract read
In one paragraph

Article in Infection and drug resistance, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Analysis of antibiotic resistance and cagPAI variability in Helicobacter pylori strains from Malaysian patients.International microbiology : the official journal of the Spanish Society for Microbiology · 2025
    Article
  4. Article
  5. Review
  6. Role of high-dose amoxicillin dual therapy forWorld journal of clinical cases · 2024
    Article
  7. Article
  8. Molecular tools of antibiotic resistance forFrontiers in gastroenterology (Lausanne, Switzerland) · 2024
    Review
  9. Article
  10. A Malaysian consensus report on the diagnosis and treatment ofJGH open : an open access journal of gastroenterology and hepatology · 2023
    Review
  11. Mutations Related to Antibiotics Resistance inAntibiotics (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Multidrug-ResistantAntibiotics (Basel, Switzerland) · 2022
    Article
  14. Article
  15. Article
  16. The Emergence of Multidrug-ResistantAntibiotics (Basel, Switzerland) · 2021
    Review
  17. Article
  18. Article
  19. Current status ofPeerJ · 2021
    Article
  20. Update on quinolone-containing rescue therapies forWorld journal of gastroenterology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Alfizah HanafiahDepartment of Medical Microbiology and Immunology.ORCID 0000-0003-4859-1439
Hasyanee BinmaeilDepartment of Medical Microbiology and Immunology.ORCID 0000-0002-2129-5800
Raja Affendi Raja AliDepartment of Medicine.
Isa Mohamed RoseDepartment of Pathology, Faculty of Medicine, Universiti Kebangsaan Malaysia, Cheras, Kuala Lumpur 56000, Malaysia.
Bruno S LopesDepartment of Medical Microbiology, School of Medicine, Medical Sciences and Nutrition, University of Aberdeen, Aberdeen AB25 2ZD, UK.
National University of Malaysia · MYUniversity of Aberdeen · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

AIMS AND

objectivesMATERIALS AND

methodsGastric biopsies from antrum (n=288) and corpus (n=283) were obtained from 288 patients who underwent endoscopy at Universiti Kebangsaan Malaysia Medical Center (UKMMC), Kuala Lumpur, Malaysia. Antibiotic susceptibility to six classes of antibiotics was determined by the E-test. Mutations conferring in resistance in functional genes were identified by PCR and sequencing.

resultsOverall resistance rates to metronidazole, clarithromycin and levofloxacin were 59.3% (35/59), 35.6% (21/59) and 25.4% (15/59), respectively. Secondary isolates showed significantly higher resistance rates to clarithromycin compared to the primary isolates. Mixed infection with susceptible and resistant isolates was observed in 16.2% (6/37) of cases, of which 83.3% (n=5) had infection with the same strain. 41% (18/44) of isolates were resistant to more than one class of antibiotics of which 50% (9/18) were multidrug-resistant, two being primary and seven being secondary isolates. Mutations in

conclusionThe high level of resistance to metronidazole, clarithromycin and levofloxacin seen in

Indexed as

antibiotic resistanceclarithromycinHelicobacter pylorilevofloxacinmetronidazolepoint mutation

Identifiers

PMID31632095
PMCPMC6774992
OpenAlexW2976226890

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.