Evidence map›Paper›PMID 31630788›Full record

ArticleAmerican journal of human genetics2019

Recessive Mutations in AP1B1 Cause Ichthyosis, Deafness, and Photophobia.

Lynn M Boyden, Lihi Atzmony, Claire Hamilton, Jing Zhou, Young H Lim, Ronghua Hu, John Pappas, Rachel Rabin, Joseph Ekstien, Yoel Hirsch and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. An AAGAB-to-CCDC32 handover mechanism controls the assembly of the AP2 adaptor complex.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Deficiency of AP1 ComplexInternational journal of molecular sciences · 2023
    Article
  6. Syndromic ichthyoses.Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2023
    Article
  7. Oligomer-to-monomer transition underlies the chaperone function of AAGAB in AP1/AP2 assembly.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Lynn M BoydenDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Lihi AtzmonyDepartment of Dermatology, Yale University School of Medicine, New Haven, CT 06510, USA; Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 6997801, Israel.
Claire HamiltonDepartment of Dermatology, Yale University School of Medicine, New Haven, CT 06510, USA.
Jing ZhouDepartment of Dermatology, Yale University School of Medicine, New Haven, CT 06510, USA.
Young H LimDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Ronghua HuDepartment of Dermatology, Yale University School of Medicine, New Haven, CT 06510, USA.
John PappasDepartment of Pediatrics, New York University School of Medicine, New York, NY 10016, USA.
Rachel RabinDepartment of Pediatrics, New York University School of Medicine, New York, NY 10016, USA.
Joseph EkstienDor Yeshorim, Committee for Prevention of Jewish Genetic Diseases, Brooklyn, NY 11211, USA.
Yoel HirschDor Yeshorim, Committee for Prevention of Jewish Genetic Diseases, Brooklyn, NY 11211, USA.
Julie PrendivilleDepartment of Pediatrics, Sidra Medical and Research Center, Doha, Qatar.
Richard P LiftonDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Shawn FergusonDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06510, USA.
Keith A ChoateDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA; Department of Dermatology, Yale University School of Medicine, New Haven, CT 06510, USA; Department of Pathology, Yale University School of Medicine, New Haven, CT 06510, USA. Electronic address: keith.choate@yale.edu.
Yale University · USNew York University · USSidra Medical and Research Center · QATel Aviv University · IL

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007205 · NIGMS · YALE UNIVERSITY · PI KAZMIERCZAK, BARBARA I · 1985 to 2019
$42.9M
Yale Center for Mendelian DisordersU54HG006504 · NHGRI · YALE UNIVERSITY · PI GERSTEIN, MARK BENDER, GUNEL, MURAT · 2012 to 2015
$11.0M
Training in Investigative DermatologyT32AR007016 · NIAMS · YALE UNIVERSITY · PI KEITH A CHOATE, MICHAEL GIRARDI · 1986 to 2026
$7.8M
Genetics and Pathobiology of Disorders of KeratinizationR01AR068392 · NIAMS · YALE UNIVERSITY · PI KEITH A CHOATE · 2015 to 2026
$5.7M
NCATS NIH HHS UL1 TR001863NHGRI NIH HHS U54 HG006504NIAMS NIH HHS R01 AR068392NIAMS NIH HHS T32 AR007016NIGMS NIH HHS T32 GM007205
6 · The paper itself

Abstract

We describe unrelated individuals with ichthyosis, failure to thrive, thrombocytopenia, photophobia, and progressive hearing loss. Each have bi-allelic mutations in AP1B1, the gene encoding the β subunit of heterotetrameric adaptor protein 1 (AP-1) complexes, which mediate endomembrane polarization, sorting, and transport. In affected keratinocytes the AP-1 β subunit is lost, and the γ subunit is greatly reduced, demonstrating destabilization of the AP-1 complex. Affected cells and tissue contain an abundance of abnormal vesicles and show hyperproliferation, abnormal epidermal differentiation, and derangement of intercellular junction proteins. Transduction of affected cells with wild-type AP1B1 rescues the vesicular phenotype, conclusively establishing that loss of AP1B1 function causes this disorder.

Indexed as

Adaptor Protein Complex 1Adaptor Protein Complex beta SubunitsCell DifferentiationCell ProliferationDeafnessFemaleGenes, RecessiveHearing LossHumansIchthyosisMaleMutationPhenotypePhotophobiaProtein SubunitsProtein TransportAdaptor Protein Complex 1Adaptor Protein Complex beta SubunitsAP1B1 protein, humanProtein SubunitsAP1B1blindnessdeafnessdisease geneexome sequencinggeneticsichthyosisMendelian

Identifiers

PMID31630788
PMCPMC6849088
OpenAlexW2980438935

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.