Evidence map›Paper›PMID 31630219›Full record

ArticleEuropean biophysics journal : EBJ2019

A statistical model for activation of Factor C by binding to LPS aggregates.

Y Miyagawa, K Kikuchi, M Tsuchiya, S Adachi

Abstract read
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In one paragraph

Article in European biophysics journal : EBJ, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Y MiyagawaFaculty of Bioenvironmental Science, Kyoto Gakuen University, 1-1 Nanjo-Ohtani, Sogabe-cho, Kameoka, Kyoto, 621-8555, Japan.
K KikuchiFaculty of Liberal Studies, National Institute of Technology Kumamoto College, 2659-2 Suya, Koshi, Kumamoto, 861-1102, Japan.
M TsuchiyaMicrobial Solutions, Charles River, 1023 Wappoo Road, Suite 43B, Charleston, SC, 29407, USA.
S AdachiFaculty of Bioenvironmental Science, Kyoto Gakuen University, 1-1 Nanjo-Ohtani, Sogabe-cho, Kameoka, Kyoto, 621-8555, Japan. adachi-s@kyotogakuen.ac.jp.
Kyoto University of Advanced Science · JPCharles River Laboratories (Netherlands) · NLNational Institute of Technology, Kumamoto College · JP

Funding

Japan Society for the Promotion of Science JP18J01966
6 · The paper itself

Abstract

Published data on Factor C activity at various LPS and Lipid A concentrations (Nakamura et al. in Eur J Biochem 176:89, 1988; Kobayashi et al. in J Biol Chem 37:25987, 2014) were rearranged to show that Factor C exhibited its maximum activity at a specific concentration of LPS. A statistical model was proposed for examining whether a single LPS molecule binding activates Factor C (monomeric activation) or dimerization of Factor C is necessary for the activation (dimeric activation). In the monomeric activation model the plots of the relative activity of Factor C against the molar ratio of LPS to Factor C were different from those in the published data. The plots in the dimeric activation model lie on a bell-shaped curve, whatever the Factor C concentration, matching the published data and indicating the appropriateness of that model. We suggest that Factor C is activated by multiple molecular interactions of Factor C with LPS aggregates on which it dimerises and that this explains why larger aggregates are less effective at activating Factor C than smaller ones.

Indexed as

Models, MolecularArthropod ProteinsEnzyme PrecursorsLipid ALipopolysaccharidesProtein BindingProtein MultimerizationProtein Structure, QuaternarySerine EndopeptidasesArthropod ProteinsEnzyme PrecursorsLimulus clotting factor CLipid ALipopolysaccharidesSerine EndopeptidasesEndotoxinFactor CLimulus amebocyte lysateLipopolysaccharideStatistical model

Identifiers

PMID31630219
OpenAlexW2980892981

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.