Evidence map›Paper›PMID 31630085›Full record

ArticleJournal of neuroscience methods2020

Decentralized distribution-sampled classification models with application to brain imaging.

Noah Lewis, Harshvardhan Gazula, Sergey M Plis, Vince D Calhoun

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Deep learning methods and applications in neuroimaging.Journal of neuroscience methods · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Noah LewisTri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, Emory University, Atlanta, GA, United States; Department of Computer Science, The University of New Mexico, Albuquerque, NM, United States. Electronic address: nlewis@gsu.edu.
Harshvardhan GazulaTri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, Emory University, Atlanta, GA, United States.
Sergey M PlisTri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, Emory University, Atlanta, GA, United States.
Vince D CalhounTri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, Emory University, Atlanta, GA, United States; Department of Computer Science, The University of New Mexico, Albuquerque, NM, United States; Department of Electrical and Computer Engineering, The University of New Mexico, Albuquerque, NM, United States.

Funding

Multivariate methods for identifying multitask/multimodal brain imaging biomarkersR01EB006841 · NIBIB · THE MIND RESEARCH NETWORK · PI VINCE D CALHOUN, Sergey Plis · 2007 to 2026
$9.8M
COINSTAC: Decentralized, Scalable Analysis of Loosely Coupled DataR01DA040487 · NIDA · THE MIND RESEARCH NETWORK · PI CALHOUN, VINCE D, PLIS, SERGEY · 2015 to 2024
$7.1M
ENIGMA-COINSTAC-APOE2 Functional and structural connectome protective mechanisms for Alzheimer’s disease and mood disorders: Request for supplemental funds for NIH R01:1R01MH121246R01MH121246 · NIMH · OHIO STATE UNIVERSITY · PI CALHOUN, VINCE D, TURNER, JESS · 2019 to 2023
$5.0M
Male/Female differences in psychosis and mood disorders:Dynamic imaging-genomic models for characterizing and predicting psychosis and mood dR01MH118695 · NIMH · GEORGIA STATE UNIVERSITY · PI ADALI, TULAY, CALHOUN, VINCE D · 2019 to 2023
$3.8M
A decentralized macro and micro gene-by-environment interaction analysis of substance use behavior and its brain biomarkers R01DA049238 · NIDA · GEORGIA STATE UNIVERSITY · PI CALHOUN, VINCE D, LIU, JINGYU · 2019 to 2023
$2.9M
Unified multivariate data-driven solutions for static and dynamic brain connectivityR01EB020407 · NIBIB · THE MIND RESEARCH NETWORK · PI ADALI, TULAY, CALHOUN, VINCE D · 2015 to 2018
$2.7M
NIBIB NIH HHS R01 EB006841NIBIB NIH HHS R01 EB020407NIDA NIH HHS R01 DA040487NIDA NIH HHS R01 DA049238NIMH NIH HHS R01 MH118695NIMH NIH HHS R01 MH121246
6 · The paper itself

Abstract

backgroundIn this age of big data, certain models require very large data stores in order to be informative and accurate. In many cases however, the data are stored in separate locations requiring data transfer between local sites which can cause various practical hurdles, such as privacy concerns or heavy network load. This is especially true for medical imaging data, which can be constrained due to the health insurance portability and accountability act (HIPAA) which provides security protocols for medical data. Medical imaging datasets can also contain many thousands or millions of features, requiring heavy network load. NEW

methodOur research expands upon current decentralized classification research by implementing a new singleshot method for both neural networks and support vector machines. Our approach is to estimate the statistical distribution of the data at each local site and pass this information to the other local sites where each site resamples from the individual distributions and trains a model on both locally available data and the resampled data. The model for each local site produces its own accuracy value which are then averaged together to produce the global average accuracy.

resultsWe show applications of our approach to handwritten digit classification as well as to multi-subject classification of brain imaging data collected from patients with schizophrenia and healthy controls. Overall, the results showed comparable classification accuracy to the centralized model with lower network load than multishot methods. COMPARISON WITH EXISTING

methodsMany decentralized classifiers are multishot, requiring heavy network traffic. Our model attempts to alleviate this load while preserving prediction accuracy.

conclusionsWe show that our proposed approach performs comparably to a centralized approach while minimizing network traffic compared to multishot methods.

Indexed as

Deep LearningMagnetic Resonance ImagingModels, TheoreticalNeuroimagingSupport Vector MachineAdultBrainDatasets as TopicFemaleHumansMaleModels, StatisticalSchizophreniaDecentralized learningDeep learningNeuroimagingStatistical inference

Identifiers

PMID31630085
PMCPMC7246039

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.