Evidence map›Paper›PMID 31628536›Full record

ArticlePlanta2019

Energy metabolism involved in fertility of the wheat TCMS line YS3038.

Yucui Han, Yujie Gao, Yue Zhao, Dazhong Zhang, Chao Zhao, Fang Xin, Ting Zhu, Mingyang Jian, Qin Ding, Lingjian Ma

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. CRISPR/Cas9-Induced Mutagenesis ofInternational journal of molecular sciences · 2022
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yucui HanCollege of Agronomy, Northwest Agriculture and Forestry University, Yangling, China.
Yujie GaoCollege of Agronomy, Northwest Agriculture and Forestry University, Yangling, China.
Yue ZhaoCollege of Agronomy, Northwest Agriculture and Forestry University, Yangling, China.
Dazhong ZhangCollege of Agronomy, Northwest Agriculture and Forestry University, Yangling, China.
Chao ZhaoCollege of Agronomy, Northwest Agriculture and Forestry University, Yangling, China.
Fang XinCollege of Agronomy, Northwest Agriculture and Forestry University, Yangling, China.
Ting ZhuCollege of Agronomy, Northwest Agriculture and Forestry University, Yangling, China.
Mingyang JianCollege of Agronomy, Northwest Agriculture and Forestry University, Yangling, China.
Qin DingCollege of Horticulture, Northwest Agriculture and Forestry University, Yangling, China. dingqin@nwafu.edu.cn.
Lingjian MaCollege of Agronomy, Northwest Agriculture and Forestry University, Yangling, China. malingjian@nwafu.edu.cn.
Northwest A&F University · CN

Funding

National key Research and Development Program of China 2016YFD0101602
6 · The paper itself

Abstract

MAIN

conclusionIn the wheat TCMS line YS3038, the anther development is inhibited from late uninucleate stage to the binucleate stage. The disruption of energy metabolism pathways by aberrant transcriptional regulation causes the male sterility under low temperatures. The utilization of thermosensitive male sterile (TMS) lines provides a basis for two-line breeding. Previous work, including morphological and cytological observations, has shown that the development process of the TMS line YS3038 is inhibited from the late uninucleate stage to the binucleate stage. Transcriptomics studies could now help to elucidate the overall expression of related genes in a specific reproductive process, revealing the metabolic network and its regulatory mechanism of the reproductive process from the transcription level. Considering the fertility characteristics of YS3038, three important stages for transcriptome analysis were determined to be the early uninucleate, late uninucleate and binucleate stages. The number of differentially expressed genes (DEGs) was found to be highest in the binucleate stage, and most were related to energy metabolism. Quantitative PCR analysis of selected genes related to energy metabolism revealed that their expression patterns were consistent with the sequencing results. Analysis of the fertility mechanism of YS3038 showed that although the tapetum of anthers was degraded in advance of the tetrad stage, the development of microspores did not result in obvious abnormalities until the binucleate stage, because the genes involved in energy metabolism pathways, including starch and sucrose metabolism (SSM), glycolysis, the tricarboxylic acid (TCA) cycle, oxidative phosphorylation, and respiration electron transport chain are differentially expressed under sterile and fertile conditions. Therefore, the pollen in YS3038 was sterile.

Indexed as

Gene Expression Regulation, PlantEnergy MetabolismFertilityGene Expression ProfilingPlant InfertilityTriticumMale sterilityPollenRNA-seqThermosensitive sterile lineTranscription factors

Identifiers

PMID31628536
OpenAlexW2980517204

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.