Evidence map›Paper›PMID 31626771›Full record

ArticleCell2019

Multimodal Analysis of Cell Types in a Hypothalamic Node Controlling Social Behavior.

Dong-Wook Kim, Zizhen Yao, Lucas T Graybuck, Tae Kyung Kim, Thuc Nghi Nguyen, Kimberly A Smith, Olivia Fong, Lynn Yi, Noushin Koulena, Nico Pierson and 9 more

Abstract read
In one paragraph

Article in Cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 154 papers.

0numbers the graph read from it
0cells of the map it votes in
154citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

154 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. ParabrachialProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Article
  7. Projection-defined hypothalamic outputs differentially regulate thermogenesis and lipolysis.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. A sexually dimorphic neuronal cluster in the mouse medial amygdala responds to male sexual status.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

94 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Dong-Wook KimProgram in Computation and Neural Systems, California Institute of Technology, Pasadena, CA, USA; Division of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA 91125, USA.
Zizhen YaoAllen Institute for Brain Science, Seattle, WA 98109, USA.
Lucas T GraybuckAllen Institute for Brain Science, Seattle, WA 98109, USA.
Tae Kyung KimAllen Institute for Brain Science, Seattle, WA 98109, USA.
Thuc Nghi NguyenAllen Institute for Brain Science, Seattle, WA 98109, USA.
Kimberly A SmithAllen Institute for Brain Science, Seattle, WA 98109, USA.
Olivia FongAllen Institute for Brain Science, Seattle, WA 98109, USA.
Lynn YiDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA.
Noushin KoulenaDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA.
Nico PiersonDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA.
Sheel ShahDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA.
Liching LoDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA; Howard Hughes Medical Institute; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA 91125, USA.
Allan-Hermann PoolDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA.
Yuki OkaDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA.
Lior PachterDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA.
Long CaiDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA.
Bosiljka TasicAllen Institute for Brain Science, Seattle, WA 98109, USA.
Hongkui ZengAllen Institute for Brain Science, Seattle, WA 98109, USA.
David J AndersonDivision of Biology and Biological Engineering 156-29, California Institute of Technology, Pasadena, CA, USA; Howard Hughes Medical Institute; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA 91125, USA. Electronic address: wuwei@caltech.edu.

Funding

Generation of novel cell type specific mouse genetic toolsU19MH114830 · NIMH · ALLEN INSTITUTE · PI ZENG, HONGKUI · 2017 to 2021
$64.7M
Region-Specific, Inducible Axonal Tract-Tracing in the BrainR01MH070053 · NIMH · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI David J Anderson · 2004 to 2026
$9.7M
Establishing a Comprehensive and Standardized Cell Type Characterization PlatformU01MH105982 · NIMH · ALLEN INSTITUTE · PI ANDERSON, DAVID J, ZENG, HONGKUI · 2014 to 2016
$5.1M
Molecular genetic dissection of central amygdala microcircuitry underlying fear aR01MH085082 · NIMH · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ANDERSON, DAVID J · 2009 to 2019
$4.1M
Multimodal and Supramodal processing of threatening emotional stimuliR01MH112593 · NIMH · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ANDERSON, DAVID J · 2017 to 2021
$2.8M
MECHANISMS OF PERIPHERALLY-MEDIATED NICOTINIC ANALGESIAF31DA005982 · NIDA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI DUSSOR, GREGORY O · 1999 to 2002
$42k
Howard Hughes Medical InstituteNIDA NIH HHS F31 DA005982NIMH NIH HHS R01 MH070053NIMH NIH HHS R01 MH085082NIMH NIH HHS R01 MH112593NIMH NIH HHS U01 MH105982NIMH NIH HHS U19 MH114830
6 · The paper itself

Abstract

The ventrolateral subdivision of the ventromedial hypothalamus (VMHvl) contains ∼4,000 neurons that project to multiple targets and control innate social behaviors including aggression and mounting. However, the number of cell types in VMHvl and their relationship to connectivity and behavioral function are unknown. We performed single-cell RNA sequencing using two independent platforms-SMART-seq (∼4,500 neurons) and 10x (∼78,000 neurons)-and investigated correspondence between transcriptomic identity and axonal projections or behavioral activation, respectively. Canonical correlation analysis (CCA) identified 17 transcriptomic types (T-types), including several sexually dimorphic clusters, the majority of which were validated by seqFISH. Immediate early gene analysis identified T-types exhibiting preferential responses to intruder males versus females but only rare examples of behavior-specific activation. Unexpectedly, many VMHvl T-types comprise a mixed population of neurons with different projection target preferences. Overall our analysis revealed that, surprisingly, few VMHvl T-types exhibit a clear correspondence with behavior-specific activation and connectivity.

Indexed as

Social BehaviorAnimalsEstrogen Receptor alphaFemaleHypothalamusMaleMiceMice, Inbred BALB CMice, Inbred C57BLNeuronsSexual Behavior, AnimalSingle-Cell AnalysisTranscriptomeEstrogen Receptor alphaaggressioncell typesestrogen receptorhypothalamusmatingmetabolismsexual dimorphismsingle-cell RNA sequencingsocial behaviorVMH

Identifiers

PMID31626771
PMCPMC7534821

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.