Evidence map›Paper›PMID 31626659›Full record

ArticlePloS one2019

Machine learning prediction of emesis and gastrointestinal state in ferrets.

Ameya C Nanivadekar, Derek M Miller, Stephanie Fulton, Liane Wong, John Ogren, Girish Chitnis, Bryan McLaughlin, Shuyan Zhai, Lee E Fisher, Bill J Yates and 1 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05789511 (High Resolution Electrogastrography), which is not on this map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05789511 unknown statusnot on this mapstarted 2022, after this paper: background citation

High Resolution Electrogastrography (HR-EGG) Assessment in Medically Refractory Gastroparesis

TypeobservationalSponsorUniversity of VirginiaRan2022 to 2025Enrolled40ConditionsGastroparesis, Lung Transplant, ComplicationsArmsHigh Resolution Electrogastography
3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Ameya C NanivadekarDept. Bioengineering, Swanson School of Engineering, Univ. Pittsburgh, Pittsburgh, PA, United States of America.ORCID 0000-0001-7889-9077
Derek M MillerDept. Otolaryngology, Univ. Pittsburgh School of Medicine, Pittsburgh, PA, United States of America.
Stephanie FultonUPMC Hillman Cancer Center, Univ. Pittsburgh School of Medicine, Pittsburgh, PA, United States of America.
Liane WongMicro-Leads Inc., Somerville, MA, United States of America.
John OgrenMicro-Leads Inc., Somerville, MA, United States of America.
Girish ChitnisMicro-Leads Inc., Somerville, MA, United States of America.
Bryan McLaughlinMicro-Leads Inc., Somerville, MA, United States of America.
Shuyan ZhaiUPMC Hillman Cancer Center, Univ. Pittsburgh School of Medicine, Pittsburgh, PA, United States of America.
Lee E FisherDept. Bioengineering, Swanson School of Engineering, Univ. Pittsburgh, Pittsburgh, PA, United States of America.
Bill J YatesDept. Otolaryngology, Univ. Pittsburgh School of Medicine, Pittsburgh, PA, United States of America.ORCID 0000-0001-6819-097X
Charles C HornUPMC Hillman Cancer Center, Univ. Pittsburgh School of Medicine, Pittsburgh, PA, United States of America.ORCID 0000-0002-5587-3912
Micro-Leads (United States) · USUniversity of Pittsburgh · USUPMC Hillman Cancer Center · US

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JOHN C. BYRD · 1988 to 2026
$158.0M
Closed-loop neuroelectric control of emesis and gastric motilityU18TR002205 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HORN, CHARLES CHRISTOPHER · 2017 to 2018
$2.1M
NCATS NIH HHS U18 TR002205NCI NIH HHS P30 CA047904
6 · The paper itself

Abstract

Although electrogastrography (EGG) could be a critical tool in the diagnosis of patients with gastrointestinal (GI) disease, it remains under-utilized. The lack of spatial and temporal resolution using current EGG methods presents a significant roadblock to more widespread usage. Human and preclinical studies have shown that GI myoelectric electrodes can record signals containing significantly more information than can be derived from abdominal surface electrodes. The current study sought to assess the efficacy of multi-electrode arrays, surgically implanted on the serosal surface of the GI tract, from gastric fundus-to-duodenum, in recording myoelectric signals. It also examines the potential for machine learning algorithms to predict functional states, such as retching and emesis, from GI signal features. Studies were performed using ferrets, a gold standard model for emesis testing. Our results include simultaneous recordings from up to six GI recording sites in both anesthetized and chronically implanted free-moving ferrets. Testing conditions to produce different gastric states included gastric distension, intragastric infusion of emetine (a prototypical emetic agent), and feeding. Despite the observed variability in GI signals, machine learning algorithms, including k-nearest neighbors and support vector machines, were able to detect the state of the stomach with high overall accuracy (>75%). The present study is the first demonstration of machine learning algorithms to detect the physiological state of the stomach and onset of retching, which could provide a methodology to diagnose GI diseases and symptoms such as nausea and vomiting.

Indexed as

Machine LearningModels, BiologicalAlgorithmsAnimalsElectromyographyFerretsGastrointestinal TractHumansInfantInfant, NewbornVomiting

Identifiers

PMID31626659
PMCPMC6799899
OpenAlexW2981248256

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.