Evidence map›Paper›PMID 31626137›Full record

ArticleMedicine2019

Circular RNA expression profile in peripheral whole blood of lung adenocarcinoma by high: Throughput sequencing.

Yinyu Mu, Fuyi Xie, YunFei Huang, Dongdong Yang, Guodong Xu, Chunnian Wang, Qiaoping Wu

Open access · goldAbstract read
In one paragraph

Article in Medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yinyu MuDepartment of Clinical Laboratory, Ningbo Medical Center Lihuili Hospital.
Fuyi XieDepartment of Clinical Laboratory, Ningbo Medical Center Lihuili Hospital.
YunFei HuangDepartment of Clinical Laboratory, Ningbo Medical Center Lihuili Hospital.
Dongdong YangDepartment of Clinical Laboratory, Ningbo Medical Center Lihuili Hospital.
Guodong XuDepartment of Cardiothoracic Surgery, Ningbo Medical Center Lihuili Hospital.
Chunnian WangNingbo Pathology Center.
Qiaoping WuDepartment of Clinical Laboratory, Ningbo Medical Center Lihuili East Hospital, Ningbo, Zhejiang Province, China.
Ningbo Medical Center Lihuili Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLung adenocarcinoma (LA) is a most common form of non-small cell lung cancer (NSCLC). To date, there are still no effective early diagnosis methods for patients to be cured in time. Noncoding RNA plays an important role in oncogenesis and tumor development. The expression profile of circular RNA (circRNA) in peripheral whole blood (PWB) of LA has not been systematically investigated. In this study, we identified the differentially expressed (DE) circRNAs in PWB of LA by high-throughput sequencing.

methodsFive paired LA and normal participants PWB samples were chosen to investigate the expression profile of circRNAs by high-throughput sequencing. Twenty LA and 10 normal controls PWB samples were subjected to reverse-transcription polymerase chain reaction (RT-PCR) for validation of circRNAs expression profile. Gene Ontology (GO) functional analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, and circRNA-miRNA network analysis was also performed to predict the function of circRNAs in PWB.

resultsA total of 10566 circRNAs were identified and annotated, most of the circRNAs were exonic (78.14%). Statistical analysis revealed 4390 DE circRNAs, in which were 3009 upregulated circRNAs and1381downregulated circRNAs in LA. RT-PCR results showed that circRNA expression in LA was higher than that in controls. GO functional analysis, KEGG pathway analysis, and circRNA-miRNA network analysis all showed that circRNAs correlated with tumor development and progression to a certain degree. The current study is the first to systematically characterize and annotate circRNA expression in PWB of LA. Some host genes of the DE circRNAs were involved in tumor signaling pathway and had complicated correlations with tumor related miRNAs, indicating that circRNAs might involve in development and progression of LA.

conclusionsOur study revealed that circRNAs were abnormally expressed in PWB of LA, which might offer potential targets for the early diagnosis of the disease and new genetic insights into LA.

Indexed as

Gene Expression Regulation, NeoplasticAdenocarcinoma of LungGene Expression ProfilingHigh-Throughput Nucleotide SequencingHumansReverse Transcriptase Polymerase Chain ReactionRNARNA, CircularRNA, NeoplasmSignal TransductionUp-RegulationRNARNA, CircularRNA, Neoplasm

Identifiers

PMID31626137
PMCPMC6824818
OpenAlexW2980999596

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.