Evidence map›Paper›PMID 31625599›Full record

ArticleBiometrics2020

On Mendelian randomization analysis of case-control study.

Han Zhang, Jing Qin, Sonja I Berndt, Demetrius Albanes, Lu Deng, Mitchell H Gail, Kai Yu

Abstract read
In one paragraph

Article in Biometrics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. A proposed theoretical framework for retinal biomarkers.Alzheimer's & dementia (Amsterdam, Netherlands) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Han ZhangNational Cancer Institute, National Institutes of Health, Rockville, Maryland.ORCID 0000-0001-7977-9616
Jing QinNational Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland.ORCID 0000-0003-2817-6326
Sonja I BerndtNational Cancer Institute, National Institutes of Health, Rockville, Maryland.
Demetrius AlbanesNational Cancer Institute, National Institutes of Health, Rockville, Maryland.
Lu DengNational Cancer Institute, National Institutes of Health, Rockville, Maryland.
Mitchell H GailNational Cancer Institute, National Institutes of Health, Rockville, Maryland.
Kai YuNational Cancer Institute, National Institutes of Health, Rockville, Maryland.ORCID 0000-0002-5337-137X

Funding

Intramural NIH HHS Z99 CA999999
6 · The paper itself

Abstract

Mendelian randomization (MR) analysis uses genotypes as instruments to estimate the causal effect of an exposure in the presence of unobserved confounders. The existing MR methods focus on the data generated from prospective cohort studies. We develop a procedure for studying binary outcomes under a case-control design. The proposed procedure is built upon two working models commonly used for MR analyses and adopts a quasi-empirical likelihood framework to address the ascertainment bias from case-control sampling. We derive various approaches for estimating the causal effect and hypothesis testing under the empirical likelihood framework. We conduct extensive simulation studies to evaluate the proposed methods. We find that the proposed empirical likelihood estimate is less biased than the existing estimates. Among all the approaches considered, the Lagrange multiplier (LM) test has the highest power, and the confidence intervals derived from the LM test have the most accurate coverage. We illustrate the use of our method in MR analysis of prostate cancer case-control data with vitamin D level as exposure and three single nucleotide polymorphisms as instruments.

Indexed as

BiasBiometryCase-Control StudiesComputer SimulationConfidence IntervalsHumansLikelihood FunctionsMaleMendelian Randomization AnalysisPolymorphism, Single NucleotideProspective StudiesProstatic NeoplasmsRegression AnalysisRisk FactorsVitamin DVitamin Dcase-control studiescausal effectempirical likelihoodinstrumental variableLagrange multiplier testMendelian randomization

Identifiers

PMID31625599
PMCPMC9653269

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.