Evidence map›Paper›PMID 31625269›Full record

ArticleAging cell2020

The Machado-Joseph disease deubiquitylase ataxin-3 interacts with LC3C/GABARAP and promotes autophagy.

Laura K Herzog, Éva Kevei, Ricardo Marchante, Claudia Böttcher, Christian Bindesbøll, Alf Håkon Lystad, Annika Pfeiffer, Maria E Gierisch, Florian A Salomons, Anne Simonsen and 2 more

Open access · goldAbstract read
In one paragraph

Article in Aging cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Guideline
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  11. Valosin Containing Protein (VCP): A Multistep Regulator of Autophagy.International journal of molecular sciences · 2022
    Review
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  16. DNAzyme Cleavage of CAG Repeat RNA in Polyglutamine Diseases.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2021
    Article
  17. International journal of molecular sciences · 2021
    Article
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Laura K HerzogDepartment of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden.
Éva KeveiInstitute for Genetics and CECAD Research Center, University of Cologne, Cologne, Germany.
Ricardo MarchanteInstitute for Genetics and CECAD Research Center, University of Cologne, Cologne, Germany.
Claudia BöttcherDepartment of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden.
Christian BindesbøllDepartment of Molecular Medicine, Faculty of Medicine, Institute of Basic Medical Sciences and Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, University of Oslo, Oslo, Norway.
Alf Håkon LystadDepartment of Molecular Medicine, Faculty of Medicine, Institute of Basic Medical Sciences and Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, University of Oslo, Oslo, Norway.
Annika PfeifferDepartment of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden.
Maria E GierischDepartment of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden.
Florian A SalomonsDepartment of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden.
Anne SimonsenDepartment of Molecular Medicine, Faculty of Medicine, Institute of Basic Medical Sciences and Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, University of Oslo, Oslo, Norway.
Thorsten HoppeInstitute for Genetics and CECAD Research Center, University of Cologne, Cologne, Germany.
Nico P DantumaDepartment of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-6090-4170
Karolinska Institutet · SEUniversity of Cologne · DEUniversity of Oslo · NO

Funding

CancerfondenCOST action BM1307 ProteostasisDeutsche ForschungsgemeinschaftEuropean Cooperation in Science and TechnologyH2020 European Research Council 616499NIH National Center for Research ResourcesNorges ForskningsrådVetenskapsrådet
6 · The paper itself

Abstract

The pathology of spinocerebellar ataxia type 3, also known as Machado-Joseph disease, is triggered by aggregation of toxic ataxin-3 (ATXN3) variants containing expanded polyglutamine repeats. The physiological role of this deubiquitylase, however, remains largely unclear. Our recent work showed that ATX-3, the nematode orthologue of ATXN3, together with the ubiquitin-directed segregase CDC-48, regulates longevity in Caenorhabditis elegans. Here, we demonstrate that the long-lived cdc-48.1; atx-3 double mutant displays reduced viability under prolonged starvation conditions that can be attributed to the loss of catalytically active ATX-3. Reducing the levels of the autophagy protein BEC-1 sensitized worms to the effect of ATX-3 deficiency, suggesting a role of ATX-3 in autophagy. In support of this conclusion, the depletion of ATXN3 in human cells caused a reduction in autophagosomal degradation of proteins. Surprisingly, reduced degradation in ATXN3-depleted cells coincided with an increase in the number of autophagosomes while levels of lipidated LC3 remained unaffected. We identified two conserved LIR domains in the catalytic Josephin domain of ATXN3 that directly interacted with the autophagy adaptors LC3C and GABARAP in vitro. While ATXN3 localized to early autophagosomes, it was not subject to lysosomal degradation, suggesting a transient regulatory interaction early in the autophagic pathway. We propose that the deubiquitylase ATX-3/ATXN3 stimulates autophagic degradation by preventing superfluous initiation of autophagosomes, thereby promoting an efficient autophagic flux important to survive starvation.

Indexed as

AnimalsAtaxin-3AutophagyCaenorhabditis elegansHumansMachado-Joseph DiseaseMicrotubule-Associated ProteinsAtaxin-3MAP1LC3C protein, humanMicrotubule-Associated Proteinsataxin-3atx-3autophagyCaenorhabditis elegansDUBubiquitin

Identifiers

PMID31625269
PMCPMC6974715
OpenAlexW2980585645

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.