Evidence map›Paper›PMID 31624858›Full record

ReviewCurrent genetics2020

Activation of ATR-related protein kinase upon DNA damage recognition.

Minh Ma, Anibian Rodriguez, Katsunori Sugimoto

Abstract readReview
In one paragraph

Review in Current genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
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  7. The first Iranian patient with You-Hoover-Fong syndrome and a review of the literature on 27 cases: expanding the genotypic and phenotypic spectrum.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2024
    Review
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  20. Smc5/6 Complex Promotes Rad3Molecular and cellular biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Minh MaDepartment of Microbiology, Biochemistry and Molecular Genetics, International Center for Public Health, New Jersey Medical School, Rutgers, The State University of New Jersey, Newark, NJ, USA.
Anibian RodriguezDepartment of Microbiology, Biochemistry and Molecular Genetics, International Center for Public Health, New Jersey Medical School, Rutgers, The State University of New Jersey, Newark, NJ, USA.
Katsunori SugimotoDepartment of Microbiology, Biochemistry and Molecular Genetics, International Center for Public Health, New Jersey Medical School, Rutgers, The State University of New Jersey, Newark, NJ, USA. nori.sugimoto@rutgers.edu.ORCID http://orcid.org/0000-0001-9374-2190
Rutgers, The State University of New Jersey · US

Funding

Regulation of ATM- and ATR-related protein kinasesR01GM120730 · NIGMS · RBHS-NEW JERSEY MEDICAL SCHOOL · PI SUGIMOTO, KATSUNORI · 2016 to 2017
$636k
NIGMS NIH HHS R01 GM120730NIH HHS GM120730
6 · The paper itself

Abstract

Chromosomes are constantly damaged by exogenous and endogenous factors. To cope with DNA damage, eukaryotic cells are equipped with three phosphatidylinositol 3-kinase-related kinases (PIKKs), such as ATM, ATR, and DNA-PK. PIKKs are structurally related to phosphatidylinositol 3-kinase (lipid kinase), however possess protein kinase activities. The Mre11-Rad50-Nbs1 and the Ku complex interact with and activate ATM and DNA-PKcs at double-stranded DNA breaks (DSBs), respectively. In contrast, ATR responds to various types of DNA lesions by interacting with replication protein A (RPA)-covered single-stranded DNA (ssDNA). Several lines of evidence have established a model in which ATR is activated by interacting with ATR activating proteins including TopBP1 and ETAA1 at DNA lesions in humans, yet the interaction of ATR with RPA-covered ssDNA does not result in ATR activation. In budding yeast, the Mec1-Ddc2 complex (Mec1-Ddc2) corresponds to ATR-ATRIP. Similar to ATR, Mec1 activation is accomplished by interactions with Mec1 activating proteins, which are Ddc1, Dpb11 (TopBP1 homolog) and Dna2. However, recent studies provide results supporting the idea that Mec1

Indexed as

DNA DamageDNA RepairSignal TransductionAdaptor Proteins, Signal TransducingAnimalsAtaxia Telangiectasia Mutated ProteinsCell Cycle ProteinsDNADNA-Binding ProteinsEukaryotaHumansIntracellular Signaling Peptides and ProteinsProtein Serine-Threonine KinasesReplication Protein ASaccharomyces cerevisiae ProteinsSaccharomycetalesAdaptor Proteins, Signal TransducingAtaxia Telangiectasia Mutated ProteinsATRIP protein, humanATR protein, humanCell Cycle ProteinsDNADNA-Binding ProteinsIntracellular Signaling Peptides and ProteinsLCD1 protein, S cerevisiaeMEC1 protein, S cerevisiaeProtein Serine-Threonine KinasesReplication Protein ASaccharomyces cerevisiae ProteinsCheckpointDdc2DNA replicationMec1Replication protein ASingle-stranded DNA

Identifiers

PMID31624858
PMCPMC7073305
OpenAlexW2980896116

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.