Evidence map›Paper›PMID 31624137›Full record

ArticleThe Journal of cell biology2019

Membrane association but not identity is required for LRRK2 activation and phosphorylation of Rab GTPases.

Rachel C Gomez, Paulina Wawro, Pawel Lis, Dario R Alessi, Suzanne R Pfeffer

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 106 citations in OpenAlex.

  1. Article
  2. Elucidating the molecular interplay between LRRK2 and Rab GTPases.bioRxiv : the preprint server for biology · 2026
    Article
  3. Lysosomal swelling triggers LRRK2 activity.bioRxiv : the preprint server for biology · 2025
    Article
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  16. Article
  17. Membrane remodeling properties of the Parkinson's disease protein LRRK2.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Rachel C GomezDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA.ORCID 0000-0002-6712-322X
Paulina WawroDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA.ORCID 0000-0002-9464-1321
Pawel LisMedical Research Council Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK.ORCID 0000-0002-4978-7671
Dario R AlessiMedical Research Council Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK.
Suzanne R PfefferDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA pfeffer@stanford.edu.ORCID 0000-0002-6462-984X
Stanford University · USUniversity of Dundee · GB

Funding

INTRACELLULAR TRANSPORT--THE MANNOSE/PHOSPHATE RECEPTORR01DK037332 · NIDDK · STANFORD UNIVERSITY · PI PFEFFER, SUZANNE R · 1986 to 2019
$4.7M
INTRACELLULAR TRANSPORT--THE MANNOSE-PHOSPHATE RECEPTORR37DK037332 · NIDDK · STANFORD UNIVERSITY · PI PFEFFER, SUZANNE R · 1999 to 2008
$3.4M
Intracellular Transport-The Mannose Phosphate ReceptorR56DK037332 · NIDDK · STANFORD UNIVERSITY · PI PFEFFER, SUZANNE R · 2014 to 2014
$120k
Medical Research Council MC_UU_00018/1Medical Research Council MC_UU_12016/2NIDDK NIH HHS R01 DK037332NIDDK NIH HHS R37 DK037332NIDDK NIH HHS R56 DK037332
6 · The paper itself

Abstract

LRRK2 kinase mutations cause familial Parkinson's disease and increased phosphorylation of a subset of Rab GTPases. Rab29 recruits LRRK2 to the trans-Golgi and activates it there, yet some of LRRK2's major Rab substrates are not on the Golgi. We sought to characterize the cell biology of LRRK2 activation. Unlike other Rab family members, we show that Rab29 binds nucleotide weakly, is poorly prenylated, and is not bound to GDI in the cytosol; nevertheless, Rab29 only activates LRRK2 when it is membrane bound and GTP bound. Mitochondrially anchored, GTP-bound Rab29 is both a LRRK2 substrate and activator, and it drives accumulation of active LRRK2 and phosphorylated Rab10 on mitochondria. Importantly, mitochondrially anchored LRRK2 is much less capable of phosphorylating plasma membrane-anchored Rab10 than soluble LRRK2. These data support a model in which LRRK2 associates with and dissociates from distinct membrane compartments to phosphorylate Rab substrates; if anchored, LRRK2 can modify misdelivered Rab substrates that then become trapped there because GDI cannot retrieve them.

Indexed as

A549 CellsCell MembraneCytosolHEK293 CellsHeLa CellsHumansLeucine-Rich Repeat Serine-Threonine Protein Kinase-2MitochondriaPhosphorylationrab GTP-Binding Proteinstrans-Golgi NetworkLeucine-Rich Repeat Serine-Threonine Protein Kinase-2LRRK2 protein, humanRab10 protein, humanRab29 protein, humanrab GTP-Binding Proteins

Identifiers

PMID31624137
PMCPMC6891090
OpenAlexW2980851597

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.