Evidence map›Paper›PMID 31624068›Full record

ArticleCold Spring Harbor molecular case studies2019

Germline

Holly Lindsay, Sarah Scollon, Jacquelyn Reuther, Horatiu Voicu, Surya P Rednam, Frank Y Lin, Kevin E Fisher, Murali Chintagumpala, Adekunle M Adesina, D Will Parsons and 2 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Guideline
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Rare cases of medulloblastoma with hypermutation.Cancer reports (Hoboken, N.J.) · 2022
    Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Novel Genetic Causes of Gastrointestinal Polyposis Syndromes.The application of clinical genetics · 2021
    Review
  16. Article
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Holly LindsayDepartment of Pediatrics, Division of Hematology-Oncology, Baylor College of Medicine, Houston, Texas 77030, USA.
Sarah ScollonDepartment of Pediatrics, Division of Hematology-Oncology, Baylor College of Medicine, Houston, Texas 77030, USA.ORCID 0000-0003-2017-0245
Jacquelyn ReutherDepartment of Pathology and Immunology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas 77030, USA.
Horatiu VoicuDepartment of Pathology and Immunology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas 77030, USA.ORCID 0000-0002-5529-5366
Surya P RednamDepartment of Pediatrics, Division of Hematology-Oncology, Baylor College of Medicine, Houston, Texas 77030, USA.ORCID 0000-0001-8333-0758
Frank Y LinDepartment of Pediatrics, Division of Hematology-Oncology, Baylor College of Medicine, Houston, Texas 77030, USA.
Kevin E FisherDepartment of Pathology and Immunology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas 77030, USA.
Murali ChintagumpalaDepartment of Pediatrics, Division of Hematology-Oncology, Baylor College of Medicine, Houston, Texas 77030, USA.
Adekunle M AdesinaDepartment of Pediatrics, Division of Hematology-Oncology, Baylor College of Medicine, Houston, Texas 77030, USA.ORCID 0000-0003-4013-7741
D Will ParsonsDepartment of Pediatrics, Division of Hematology-Oncology, Baylor College of Medicine, Houston, Texas 77030, USA.
Sharon E PlonDepartment of Pediatrics, Division of Hematology-Oncology, Baylor College of Medicine, Houston, Texas 77030, USA.ORCID 0000-0002-9626-0936
Angshumoy RoyDepartment of Pediatrics, Division of Hematology-Oncology, Baylor College of Medicine, Houston, Texas 77030, USA.ORCID 0000-0001-7248-8576
Baylor College of Medicine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ultra-hypermutation (>100 mutations/Mb) is rare in childhood cancer genomes and has been primarily reported in patients with constitutional mismatch repair deficiency (CMMRD) caused by biallelic germline mismatch repair (MMR) gene mutations. We report a 5-yr-old child with classic clinical features of CMMRD and an ultra-hypermutated medulloblastoma with retained MMR protein expression and absence of germline MMR mutations. Mutational signature analysis of tumor panel sequencing data revealed a canonical DNA polymerase-deficiency-associated signature, prompting further genetic testing that uncovered a germline

Indexed as

Brain NeoplasmsCerebellar NeoplasmsChild, PreschoolColorectal NeoplasmsDNA-Binding ProteinsDNA Mismatch RepairDNA Mutational AnalysisDNA Polymerase IIFemaleGenetic Predisposition to DiseaseGenetic TestingGerm CellsGerm-Line MutationHumansMedulloblastomaMutationDNA-Binding ProteinsDNA Polymerase IIPOLE protein, humanPoly-ADP-Ribose Binding Proteinscerebellar medulloblastoma

Identifiers

PMID31624068
PMCPMC6824253
OpenAlexW2980766782

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.