Evidence map›Paper›PMID 31623347›Full record

ArticleCancers2019

Classic Chromophobe Renal Cell Carcinoma Incur a Larger Number of Chromosomal Losses Than Seen in the Eosinophilic Subtype.

Riuko Ohashi, Peter Schraml, Silvia Angori, Aashil A Batavia, Niels J Rupp, Chisato Ohe, Yoshiro Otsuki, Takashi Kawasaki, Hiroshi Kobayashi, Kazuhiro Kobayashi and 13 more

Abstract read
In one paragraph

Article in Cancers, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. New developments in existing WHO entities and evolving molecular concepts: The Genitourinary Pathology Society (GUPS) update on renal neoplasia.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
    Guideline
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  10. Review
  11. Low-grade oncocytic renal tumor (LOT): mutations in mTOR pathway genes and low expression of FOXI1.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2022
    Article
  12. Germline and sporadic mTOR pathway mutations in low-grade oncocytic tumor of the kidney.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2022
    Article
  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Riuko OhashiHistopathology Core Facility, Faculty of Medicine, Niigata University, Niigata 951-8510, Japan. riuko@med.niigata-u.ac.jp.ORCID 0000-0001-5820-7870
Peter SchramlDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, CH-8091 Zurich, Switzerland. Peter.Schraml@usz.ch.
Silvia AngoriDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, CH-8091 Zurich, Switzerland. Silvia.Angori@usz.ch.
Aashil A BataviaDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, CH-8091 Zurich, Switzerland. Aashil.Batavia@usz.ch.
Niels J RuppDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, CH-8091 Zurich, Switzerland. niels.rupp@usz.ch.
Chisato OheDepartment of Pathology and Laboratory Medicine, Kansai Medical University, Hirakata, Osaka 573-1010, Japan. ohec@hirakata.kmu.ac.jp.
Yoshiro OtsukiDepartment of Pathology, Seirei Hamamatsu General Hospital, Hamamatsu, Shizuoka 430-8558, Japan. otsuki@sis.seirei.or.jp.ORCID 0000-0002-0568-3811
Takashi KawasakiDepartment of Pathology, Niigata Cancer Center Hospital, Niigata 951-8566, Japan. takawa@niigata-cc.jp.ORCID 0000-0003-3972-9889
Hiroshi KobayashiDepartment of Pathology, Tachikawa General Hospital, Nagaoka, Niigata 940-8621, Japan. h-kobayashi15@tatikawa.or.jp.
Kazuhiro KobayashiDepartment of Pathology, Gifu University Hospital, Gifu 501-1194, Japan. hern@live.jp.ORCID 0000-0002-5390-8966
Tatsuhiko MiyazakiDepartment of Pathology, Gifu University Hospital, Gifu 501-1194, Japan. tats_m@gifu-u.ac.jp.ORCID 0000-0002-4750-2046
Hiroyuki ShibuyaDepartment of Pathology, Niigata City General Hospital, Niigata 950-1197, Japan. shibuya2u@hosp.niigata.niigata.jp.ORCID 0000-0002-3052-2358
Hiroyuki UsudaDepartment of Diagnostic Pathology, Nagaoka Red Cross Hospital, Nagaoka, Niigata 940-2085, Japan. usuda@nagaoka.jrc.or.jp.
Hajime UmezuDivision of Pathology, Niigata University Medical & Dental Hospital, Niigata 951-8520, Japan. umezu@med.niigata-u.ac.jp.
Fumiyoshi FujishimaDepartment of Anatomic Pathology, Graduate School of Medicine, Tohoku University, Sendai, Miyagi 980-8575, Japan. ffujishima@patholo2.med.tohoku.ac.jp.
Bungo FurusatoCancer Genomics Unit, Clinical Genomics Center, Nagasaki University Hospital, Nagasaki 852-8501, Japan. befurusato@me.com.
Mitsumasa OsakabeDepartment of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, Yahaba-cho, Shiwa-gun, Iwate 028-3695, Japan. mosakabe@iwate-med.ac.jp.ORCID 0000-0002-1797-3189
Tamotsu SugaiDepartment of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, Yahaba-cho, Shiwa-gun, Iwate 028-3695, Japan. tsugai@iwate-med.ac.jp.
Naoto KurodaDepartment of Diagnostic Pathology, Kochi Red Cross Hospital, Kochi 780-8562, Japan. kurochankochi@yahoo.co.jp.
Toyonori TsuzukiDepartment of Surgical Pathology, Aichi Medical University Hospital, Nagakute, Aichi 480-1195, Japan. tsuzuki@aichi-med-u.ac.jp.
Yoji NagashimaDepartment of Surgical Pathology, Tokyo Women's Medical University Hospital, Shinjuku-ku, Tokyo 162-8666, Japan. nagashima.yoji@twmu.ac.jp.
Yoichi AjiokaHistopathology Core Facility, Faculty of Medicine, Niigata University, Niigata 951-8510, Japan. ajioka@med.niigata-u.ac.jp.
Holger MochDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, CH-8091 Zurich, Switzerland. holger.moch@usz.ch.

Funding

Niigata Foundation for the Promotion of Medicine 2015Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung S-87701-03-01
6 · The paper itself

Abstract

Chromophobe renal cell carcinoma (chRCC) is a renal tumor subtype with a good prognosis, characterized by multiple chromosomal copy number variations (CNV). The World Health Organization (WHO) chRCC classification guidelines define a classic and an eosinophilic variant. Large cells with reticular cytoplasm and prominent cell membranes (pale cells) are characteristic for classic chRCC. Classic and eosinophilic variants were defined in 42 Swiss chRCCs, 119 Japanese chRCCs and in whole-slide digital images of 66 chRCCs from the Cancer Genome Atlas (TCGA) kidney chromophobe (KICH) dataset. 32 of 42 (76.2%) Swiss chRCCs, 90 of 119 (75.6%) Japanese chRCCs and 53 of 66 (80.3%) TCGA-KICH were classic chRCCs. There was no survival difference between eosinophilic and classic chRCC in all three cohorts. To identify a genotype/phenotype correlation, we performed a genome-wide CNV analysis using Affymetrix OncoScan

Indexed as

chromophobe renal cell carcinomachromosomal losscopy number analysiseosinophilic variantpale cellrenal cell carcinoma

Identifiers

PMID31623347
PMCPMC6826417

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.