Evidence map›Paper›PMID 31622281›Full record

ArticleJCI insight2019

A unique mutator phenotype reveals complementary oncogenic lesions leading to acute leukemia.

Mianmian Yin, Timour Baslan, Robert L Walker, Yuelin J Zhu, Amy Freeland, Toshihiro Matsukawa, Sriram Sridharan, André Nussenzweig, Steven C Pruitt, Scott W Lowe and 2 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Mcm2 hypomorph leads to acute leukemia or hematopoietic stem cell failure, dependent on genetic context.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Article
  10. MutantCancer research · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Mianmian YinGenetics Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Timour BaslanCancer Biology and Genetics Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Robert L WalkerGenetics Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Yuelin J ZhuGenetics Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Amy FreelandDepartment of Molecular and Cellular Biology, Roswell Park Cancer Institute, Buffalo, New York, USA.
Toshihiro MatsukawaGenetics Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Sriram SridharanLaboratory of Genome Integrity, National Cancer Institute, NIH, Bethesda, Maryland, USA.
André NussenzweigLaboratory of Genome Integrity, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Steven C PruittDepartment of Molecular and Cellular Biology, Roswell Park Cancer Institute, Buffalo, New York, USA.
Scott W LoweCancer Biology and Genetics Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Paul S MeltzerGenetics Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Peter D AplanGenetics Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland, USA.
National Cancer Institute · USMemorial Sloan Kettering Cancer Center · USNational Human Genome Research Institute · USRoswell Park Comprehensive Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
VIRAL TRANSACTIVATIONP01CA013106 · NCI · COLD SPRING HARBOR LABORATORY · PI Camila dos Santos · 1985 to 2026
$116.8M
Collaborative Pathways that Lead to LeukemiaZIABC010982 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI APLAN, PETER · 2009 to 2025
$8.7M
Replication Licensing in Genome Stability, Cancer and AgingR01CA130995 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI KNUDSEN, ERIK · 2008 to 2022
$5.3M
Mutation Mechanisms Leading to Malignant Transformation, Including Chromosomal Translocation and Point MutationsZIASC010379 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI APLAN, PETER · 2009 to 2025
$4.9M
Mechanisms of Chromosomal TranslocationZ01SC010379 · SC · DIVISION OF CLINICAL SCIENCES - NCI · PI APLAN, PETER D · 2001 to 2008
$933k
Next Generation DNA SequencerS10OD020122 · OD · COLD SPRING HARBOR LABORATORY · PI MCCOMBIE, WILLIAM RICHARD · 2015 to 2015
$523k
Collaborative Pathways that Lead to LeukemiaZ01BC010982 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI APLAN, PETER · 2008 to 2008
$344k
Howard Hughes Medical InstituteIntramural NIH HHS Z01 BC010982Intramural NIH HHS Z01 SC010379Intramural NIH HHS ZIA BC010982Intramural NIH HHS ZIA SC010379NCI NIH HHS P01 CA013106NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA130995NIH HHS S10 OD020122
6 · The paper itself

Abstract

Mice homozygous for a hypomorphic allele of DNA replication factor minichromosome maintenance protein 2 (designated Mcm2cre/cre) develop precursor T cell lymphoblastic leukemia/lymphoma (pre-T LBL) with 4-32 small interstitial deletions per tumor. Mice that express a NUP98-HOXD13 (NHD13) transgene develop multiple types of leukemia, including myeloid and T and B lymphocyte. All Mcm2cre/cre NHD13+ mice develop pre-T LBL, and 26% develop an unrelated, concurrent B cell precursor acute lymphoblastic leukemia (BCP-ALL). Copy number alteration (CNA) analysis demonstrated that pre-T LBLs were characterized by homozygous deletions of Pten and Tcf3 and partial deletions of Notch1 leading to Notch1 activation. In contrast, BCP-ALLs were characterized by recurrent deletions involving Pax5 and Ptpn1 and copy number gain of Abl1 and Nup214 resulting in a Nup214-Abl1 fusion. We present a model in which Mcm2 deficiency leads to replicative stress, DNA double strand breaks (DSBs), and resultant CNAs due to errors in DNA DSB repair. CNAs that involve critical oncogenic pathways are then selected in vivo as malignant lymphoblasts because of a fitness advantage. Some CNAs, such as those involving Abl1 and Notch1, represent attractive targets for therapy.

Indexed as

PhenotypeAnimalsBasic Helix-Loop-Helix ProteinsCarcinogenesisCell Line, TumorDisease Models, AnimalDNA Copy Number VariationsGene Expression Regulation, NeoplasticHomeodomain ProteinsHumansLeukemia, Myeloid, AcuteMiceMice, Inbred C57BLMinichromosome Maintenance Complex Component 2Nuclear Pore Complex ProteinsPAX5 Transcription FactorBasic Helix-Loop-Helix ProteinsHomeodomain ProteinsHoxd13 protein, mouseMcm2 protein, mouseMinichromosome Maintenance Complex Component 2Notch1 protein, mousenuclear pore complex protein 98Nuclear Pore Complex ProteinsNup214 protein, mousePax5 protein, mousePAX5 Transcription FactorProtein Tyrosine Phosphatase, Non-Receptor Type 1Proto-Oncogene Proteins c-ablPtpn1 protein, mouseReceptor, Notch1Tcf3 protein, mouseTranscription FactorsCancerGenetic instabilityGeneticsHematologyLeukemias

Identifiers

PMID31622281
PMCPMC6962024
OpenAlexW2980613559

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.