Evidence map›Paper›PMID 31621006›Full record

ArticlePlant molecular biology2019

Characterization of HemY-type protoporphyrinogen IX oxidase genes from cyanobacteria and their functioning in transgenic Arabidopsis.

Joonseon Yoon, Yunjung Han, Young Ock Ahn, Myoung-Ki Hong, Soon-Kee Sung

Abstract read
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In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Joonseon YoonFarmHannong Co., Ltd., Yeoui-daero 24, Yeongdeungpo-gu, Seoul, 07320, Republic of Korea.
Yunjung HanFarmHannong Co., Ltd., Yeoui-daero 24, Yeongdeungpo-gu, Seoul, 07320, Republic of Korea.
Young Ock AhnFarmHannong Co., Ltd., Yeoui-daero 24, Yeongdeungpo-gu, Seoul, 07320, Republic of Korea.
Myoung-Ki HongFarmHannong Co., Ltd., Yeoui-daero 24, Yeongdeungpo-gu, Seoul, 07320, Republic of Korea.
Soon-Kee SungFarmHannong Co., Ltd., Yeoui-daero 24, Yeongdeungpo-gu, Seoul, 07320, Republic of Korea. soonkee@farmhannong.com.
Yuhan University · KR

Funding

BioGreen 21 Program of the Rural Development Administration (RDA) PJ01121901BioGreen 21 Program of the Rural Development Administration (RDA) PJ01186401Korea Institute of Planning and Evaluation for Technology in Food, Agriculture, and Forestry (IPET) of the Ministry of Agriculture, Food, and Rural Affairs (MAFRA) 814004-3
6 · The paper itself

Abstract

key messageWe investigated the functions of two cyanobacterial HemY protoporphyrinogen IX oxidase (PPO) genes with in vitro and in vivo assays and evaluated their applicability as resistance traits to PPO-inhibiting herbicides. We isolated HemY-type protoporphyrinogen IX oxidase (PPO) genes from cyanobacteria, OnPPO gene from Oscillatoria nigro-viridis PCC7112 and HaPPO gene from Halothece sp. PCC7418. The alignment of amino acid sequences as well as phylogenetic analyses conducted showed that OnPPO and HaPPO are classified as HemY-type PPO and are more closely related to plastidic PPOs than to mitochondrial PPOs. The PPO-deficient Escherichia coli BT3 strain, which requires heme supplementation, could obtain normal growth in the absence of heme supplementation when complemented with OnPPO and HaPPO. The enzyme assays of OnPPO, HaPPO, and Arabidopsis thaliana PPO1 (AtPPO1) proteins each revealed different kinetic properties in terms of catalytic efficiency, substrate affinity, and the degree of inhibition by PPO inhibitors. In particular, the catalytic efficiencies (k

Indexed as

ArabidopsisArabidopsis ProteinsHerbicide ResistanceProtoporphyrinogen OxidasePyrimidinonesSulfonamidesTiagabineArabidopsis ProteinsN'-(2-chloro-4-fluoro-5-(3-methyl-2,6-dioxo-4(trifluoromethyl)-3,6-dihydro-1(2H)-pyrimidinyl)benzoyl)-N-isopropyl-N-methylsulfamideProtoporphyrinogen OxidasePyrimidinonesSulfonamidesTiagabineCyanobacteriaHemY PPOHerbicide resistanceProtoporphyrinogen IX oxidase (PPO)SaflufenacilTiafenacil

Identifiers

PMID31621006
OpenAlexW2981249918

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.