Evidence map›Paper›PMID 31620139›Full record

ArticleFrontiers in immunology2019

Increased T Cell Differentiation and Cytolytic Function in Bangladeshi Compared to American Children.

Lisa E Wagar, Christopher R Bolen, Natalia Sigal, Cesar J Lopez Angel, Leying Guan, Beth D Kirkpatrick, Rashidul Haque, Robert J Tibshirani, Julie Parsonnet, William A Petri and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

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  11. Identification of Common CD8Journal of virology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Lisa E WagarDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Christopher R BolenDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Natalia SigalInstitute for Immunity, Transplantation, and Infection, Stanford University, Stanford, CA, United States.
Cesar J Lopez AngelDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Leying GuanData Sciences and Statistics, Stanford University, Stanford, CA, United States.
Beth D KirkpatrickDepartment of Microbiology and Molecular Genetics, University of Vermont College of Medicine and Vaccine Testing Center, Burlington, VT, United States.
Rashidul HaqueInternational Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.
Robert J TibshiraniData Sciences and Statistics, Stanford University, Stanford, CA, United States.
Julie ParsonnetDepartments of Medicine and of Health Research and Policy, Stanford University, Stanford, CA, United States.
William A PetriDepartment of Medicine, Pathology, and Microbiology, Immunology and Cancer Biology, University of Virginia, Charlottesville, VA, United States.
Mark M DavisDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Stanford University · USInternational Centre for Diarrhoeal Disease Research · BDUniversity of Vermont · USUniversity of Virginia · US

Funding

Using a tonsil organoid system to probe conditions for the induction of protective antibody and T cell responses to influenza.U19AI057229 · NIAID · STANFORD UNIVERSITY · PI Mark Morris Davis · 2003 to 2026
$88.5M
FIELD STUDIES OF IMMUNITY TO AMEBIASIS IN BANGLADESHR01AI043596 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI CAROL A GILCHRIST, William A Petri · 1998 to 2026
$7.7M
Childhood infection and prevention of obesityR01HD063142 · NICHD · STANFORD UNIVERSITY · PI PARSONNET, JULIE · 2009 to 2013
$3.7M
CyTOFS10OD016318 · OD · STANFORD UNIVERSITY · PI NOLAN, GARRY P · 2013 to 2013
$600k
NIAID NIH HHS R01 AI043596NIAID NIH HHS U19 AI057229NICHD NIH HHS R01 HD063142NIH HHS S10 OD016318NIH HHS S10OD016318-01
6 · The paper itself

Abstract

During the first 5 years of life, children are especially vulnerable to infection-related morbidity and mortality. Conversely, the Hygiene Hypothesis suggests that a lack of exposure to infectious agents early in life could explain the increasing incidence of allergies and autoimmunity in high-income countries. Understanding these phenomena, however, is hampered by a lack of comprehensive, direct immune monitoring in children with differing degrees of microbial exposure. Using mass cytometry, we provide an in-depth profile of the peripheral blood mononuclear cells (PBMCs) of children in regions at the extremes of exposure: the San Francisco Bay Area, USA and an economically poor district of Dhaka, Bangladesh. Despite variability in clinical health, functional characteristics of PBMCs were similar in Bangladeshi and American children at 1 year of age. However, by 2-3 years of age, Bangladeshi children's immune cells often demonstrated altered activation and cytokine production profiles upon stimulation with PMA-ionomycin, with an overall immune trajectory more in line with American adults. Conversely, immune responses in children from the US remained steady. Using principal component analysis, donor location, ethnic background, and cytomegalovirus infection status were found to account for some of the variation identified among samples. Within Bangladeshi 1-year-olds, stunting (as measured by height-for-age z-scores) was found to be associated with IL-8 and TGFβ expression in PMA-ionomycin stimulated samples. Combined, these findings provide important insights into the immune systems of children in high vs. low microbial exposure environments and suggest an important role for IL-8 and TGFβ in mitigating the microbial challenges faced by the Bangladeshi children.

Indexed as

BangladeshCell DifferentiationChildChild, PreschoolCytokinesFemaleHumansInfantInterleukin-8Leukocytes, MononuclearLymphocyte ActivationMaleT-LymphocytesTransforming Growth Factor betaTransforming Growth Factor beta1United StatesCytokinesInterleukin-8Transforming Growth Factor betaTransforming Growth Factor beta1CyTOFenvironmentimmune developmentimmune profilingpediatric immunity

Identifiers

PMID31620139
PMCPMC6763580
OpenAlexW2972032545

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.