Evidence map›Paper›PMID 31619715›Full record

ArticleScientific reports2019

Methylation content sensitive enzyme ddRAD (MCSeEd): a reference-free, whole genome profiling system to address cytosine/adenine methylation changes.

Gianpiero Marconi, Stefano Capomaccio, Cinzia Comino, Alberto Acquadro, Ezio Portis, Andrea Porceddu, Emidio Albertini

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
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  4. Transcriptome-guided breeding for Paspalum notatum: producing apomictic hybrids with enhanced omega-3 content.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  5. Article
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  7. Article
  8. Article
  9. Exploitation of epigenetic variation of crop wild relatives for crop improvement and agrobiodiversity preservation.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. DNA NPlants (Basel, Switzerland) · 2020
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Gianpiero MarconiDepartment Agricultural, Food and Environmental Sciences, University of Perugia, Perugia, Italy.ORCID http://orcid.org/0000-0003-2669-0399
Stefano CapomaccioDepartment of Veterinary Medicine, University of Perugia, Perugia, Italy.ORCID http://orcid.org/0000-0002-0004-9272
Cinzia CominoDepartment of Agricultural, Forest and Food Sciences, Plant Genetics and Breeding, University of Torino, Grugliasco, Italy.
Alberto AcquadroDepartment of Agricultural, Forest and Food Sciences, Plant Genetics and Breeding, University of Torino, Grugliasco, Italy.
Ezio PortisDepartment of Agricultural, Forest and Food Sciences, Plant Genetics and Breeding, University of Torino, Grugliasco, Italy.
Andrea PorcedduDepartment of Agriculture, University of Sassari, Sassari, Italy.
Emidio AlbertiniDepartment Agricultural, Food and Environmental Sciences, University of Perugia, Perugia, Italy. emidio.albertini@unipg.it.ORCID http://orcid.org/0000-0003-2585-5649

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methods for investigating DNA methylation nowadays either require a reference genome and high coverage, or investigate only CG methylation. Moreover, no large-scale analysis can be performed for N

Indexed as

Epigenesis, GeneticGenome, PlantAdenineComputational BiologyCytosineDNADNA MethylationDNA Restriction EnzymesGenetic VariationHigh-Throughput Nucleotide SequencingInternetSequence Analysis, DNASoftwareZea maysAdenineCytosineDNADNA Restriction Enzymes

Identifiers

PMID31619715
PMCPMC6795852

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.