Evidence map›Paper›PMID 31619317›Full record

ArticleBMB reports2019

Deficiency of calpain-6 inhibits primary ciliogenesis.

Bo Hye Kim, Do Yeon Kim, Sumin Oh, Je Yeong Ko, Gyuyeong Rah, Kyung Hyun Yoo, Jong Hoon Park

Open access · goldAbstract read
In one paragraph

Article in BMB reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Potential Link Between a DisruptiveInternational journal of molecular sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Bo Hye KimDepartment of Biological Sciences, Sookmyung Women's University, Seoul 04310, Korea.
Do Yeon KimDepartment of Biological Sciences, Sookmyung Women's University, Seoul 04310, Korea.
Sumin OhDepartment of Biological Sciences, Sookmyung Women's University, Seoul 04310, Korea.
Je Yeong KoDepartment of Biological Sciences, Sookmyung Women's University, Seoul 04310, Korea.
Gyuyeong RahDepartment of Biological Sciences, Sookmyung Women's University, Seoul 04310, Korea.
Kyung Hyun YooDepartment of Biological Sciences, Sookmyung Women's University, Seoul 04310, Korea.
Jong Hoon ParkDepartment of Biological Sciences, Sookmyung Women's University, Seoul 04310, Korea.
Sookmyung Women's University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The primary cilium is a microtubule-based structure projecting from a cell. Although the primary cilium shows no motility, it can recognize environmental stimuli. Thus, ciliary defects cause severe abnormalities called ciliopathies. Ciliogenesis is a very complex process and involves a myriad of components and regulators. In order to excavate the novel positive regulators of ciliogenesis, we performed mRNA microarray using starved NIH/3T3 cells. We selected 62 murine genes with corresponding human orthologs, with significantly upregulated expression at 24 h after serum withdrawal. Finally, calpain-6 was selected as a positive regulator of ciliogenesis. We found that calpain-6 deficiency reduced the percentage of ciliated cells and impaired sonic hedgehog signaling. It has been speculated that this defect might be associated with decreased levels of α-tubulin acetylation at lysine 40. This is the first study to report a novel role of calpain-6 in the formation of primary cilia. [BMB Reports 2019; 52(10): 619-624].

Indexed as

AcetylationAnimalsCalpainCiliaHedgehog ProteinsMiceMicroarray AnalysisMicrotubulesNIH 3T3 CellsSignal TransductionTubulinCalpainHedgehog ProteinsTubulin

Identifiers

PMID31619317
PMCPMC6827577
OpenAlexW2986758714

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.