Evidence map›Paper›PMID 31619170›Full record

ArticleBMC plant biology2019

Changes in gene expression and metabolic profile of drupes of Olea europaea L. cv Carolea in relation to maturation stage and cultivation area.

Leonardo Bruno, Ernesto Picardi, Marianna Pacenza, Adriana Chiappetta, Antonella Muto, Olimpia Gagliardi, Innocenzo Muzzalupo, Graziano Pesole, Maria Beatrice Bitonti

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Freeze-Dependent Physiological and Transcriptional Changes inInternational journal of molecular sciences · 2025
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  6. Modulation of Anthocyanin Biosynthesis-Related Genes during the Ripening ofInternational journal of molecular sciences · 2023
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  7. Article
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  9. Article
  10. Review
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  12. Review
  13. Article
  14. Olive Fruit Development and Ripening: Break on through to the "-Omics" Side.International journal of molecular sciences · 2021
    Review
  15. Coupling the endophytic microbiome with the host transcriptome in olive roots.Computational and structural biotechnology journal · 2021
    Article
  16. The Application ofJournal of fungi (Basel, Switzerland) · 2020
    Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Leonardo BrunoDipartimento di Biologia, Ecologia e Scienze della Terra, Università della Calabria, 87036, Arcavacata di Rende (CS), Italy.
Ernesto PicardiDepartment of Biosciences, Biotechnology and Biopharmaceutics, University of Bari A. Moro, Bari, Italy.
Marianna PacenzaDipartimento di Biologia, Ecologia e Scienze della Terra, Università della Calabria, 87036, Arcavacata di Rende (CS), Italy.
Adriana ChiappettaDipartimento di Biologia, Ecologia e Scienze della Terra, Università della Calabria, 87036, Arcavacata di Rende (CS), Italy.
Antonella MutoDipartimento di Biologia, Ecologia e Scienze della Terra, Università della Calabria, 87036, Arcavacata di Rende (CS), Italy.
Olimpia GagliardiDipartimento di Biologia, Ecologia e Scienze della Terra, Università della Calabria, 87036, Arcavacata di Rende (CS), Italy.
Innocenzo MuzzalupoCentro di Ricerca per l'Olivicoltura-Frutticoltura-Agrumicoltura (OFA) Consiglio per la Ricerca in agricoltura e l'analisi dell'Economia Agraria (CREA) C.da Li Rocchi-Vermicelli, 87036, Rende (CS), Italy.
Graziano PesoleDepartment of Biosciences, Biotechnology and Biopharmaceutics, University of Bari A. Moro, Bari, Italy.
Maria Beatrice BitontiDipartimento di Biologia, Ecologia e Scienze della Terra, Università della Calabria, 87036, Arcavacata di Rende (CS), Italy. maria_beatrice.bitonti@unical.it.ORCID http://orcid.org/0000-0002-5614-9248
University of Calabria · ITInstitute of Biomembranes, Bioenergetics and Molecular Biotechnologies · ITCentro di Ricerca per l’Orticoltura · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOlive (Olea europaea L.) is an emblematic oil tree crop in the Mediterranean basin. Currently, despite olive features as a moderately thermophilic species, its cultivation is worldwide spreading due to the health-related impact of olive products on human nutrition. A point of concern for the expanding olive cultivation is related to the influence that, in addition to genotype, environmental factors exerts on drupe development and metabolism with consequent impact on fruit key traits. In this context, the aim of the present work was to gain further information on the genetic networks controlling drupe maturation phase and, mainly, on their modulation in response to environmental cues.

resultsTo achieve this goal, a comparative transcriptome-wide investigation was carried out on drupes of Olea europaea cultivar Carolea, collected from plants growing in areas at different altitude level and therefore experiencing different climatic conditions. Two maturation stages of drupe were analysed: green mature and turning-purple. Metabolic characterization of drupe was also performed. At both transcriptomic and metabolic level differences were detected in the pathway of fatty acids (FAs) and phenol compounds, in relation to both drupe maturation stage and cultivation area. Among the most relevant differences detected during the transition from GM to TP stages there were: the upregulation of FADs genes in the drupes of population growing at 700 masl, the upregulation of phenol biosynthesis-related genes in drupes growing at 10 and 200 masl and very interestingly the downregulation of specific genes involved in secoiridoids production in drupes growing at 700 masl. Globally, these results suggested that stability of FAs and phenols, mainly of secoiridoids group, is promoted at high altitude, while at lower altitude phenol biosynthesis is prolonged.

conclusionThe obtained results showed a differential modulation of genetic pathways related to olive compound quality in relation to the cultivation area, likely imposed by the different temperature impending at each altitude. The derived molecular information appears of interest for both breeding and biotechnological programs of olive species, especially with respect to the modulation of antioxidant secoiridoid compounds which play a key role in conferring both sensorial and healthy characteristic to olive products.

Indexed as

MetabolomeTranscriptomeFatty AcidsFruitGene Regulatory NetworksGenotypeHumansOleaPhenolsFatty AcidsPhenolsCultivation areaDrupe maturationMetabolic profileOlea europaea L.Transcriptome

Identifiers

PMID31619170
PMCPMC6796363
OpenAlexW2980539236

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.