Evidence map›Paper›PMID 31616946›Full record

ReviewJournal of experimental botany2019

Comparative genomics can provide new insights into the evolutionary mechanisms and gene function in CAM plants.

Xiaohan Yang, Degao Liu, Timothy J Tschaplinski, Gerald A Tuskan

Open access · bronzeAbstract readComparative StudyReview
In one paragraph

Review in Journal of experimental botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 33 citations in OpenAlex.

  1. Engineering Crassulacean Acid Metabolism in CCold Spring Harbor perspectives in biology · 2024
    Review
  2. Review
  3. Article
  4. Review
  5. The CAM lineages of planet Earth.Annals of botany · 2023
    Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Review
  11. Biosystems Design to Accelerate CBiodesign research · 2020
    Review
  12. Article
  13. New perspectives on crassulacean acid metabolism biology.Journal of experimental botany · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Xiaohan YangBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Degao LiuDepartment of Genetics, Cell Biology and Development and Center for Precision Plant Genomics, University of Minnesota, Saint Paul, MN, USA.
Timothy J TschaplinskiBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Gerald A TuskanBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Oak Ridge National Laboratory · USUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Crassulacean acid metabolism (CAM) photosynthesis is an important biological innovation enabling plant adaptation to hot and dry environments. CAM plants feature high water-use efficiency, with potential for sustainable crop production under water-limited conditions. A deep understanding of CAM-related gene function and molecular evolution of CAM plants is critical for exploiting the potential of engineering CAM into C3 crops to enhance crop production on semi-arid or marginal agricultural lands. With the newly emerging genomics resources for multiple CAM species, progress has been made in comparative genomics studies on the molecular basis and subsequently on the evolution of CAM. Here, recent advances in CAM comparative genomics research in constitutive and facultative CAM plants are reviewed, with a focus on the analyses of DNA/protein sequences and gene expression to provide new insights into the path and driving force of CAM evolution and to identify candidate genes involved in CAM-related biological processes. Potential applications of new computational and experimental technologies (e.g. CRISPR/Cas-mediated genome-editing technology) to the comparative and evolutionary genomics research on CAM plants are offered.

Indexed as

Evolution, MolecularGenes, PlantGenomicsCarboxylic AcidsPlantsResearchCarboxylic AcidsComparative genomicscrassulacean acid metabolismdrought stressevolutiongene functiongenome editingphotosynthesis

Identifiers

PMID31616946
PMCPMC6883262
OpenAlexW2971997333

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.