Evidence map›Paper›PMID 31616926›Full record

ArticleBiology of reproduction2020

Molecular fingerprint of female bovine embryos produced in vitro with high competence to establish and maintain pregnancy†.

A M Zolini, J Block, M B Rabaglino, P Tríbulo, M Hoelker, G Rincon, J J Bromfield, P J Hansen

Open access · bronzeAbstract read
In one paragraph

Article in Biology of reproduction, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Pre-Implantation Bovine Embryo Evaluation-From Optics to Omics and Beyond.Animals : an open access journal from MDPI · 2023
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Cytokines That Serve as Embryokines in Cattle.Animals : an open access journal from MDPI · 2021
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
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  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

A M ZoliniDepartment of Animal Sciences, D.H. Barron Reproductive and Perinatal Biology Research Program, and Genetics Institute, University of Florida, Gainesville, Florida, USA.
J BlockZoetis Inc., Kalamazoo, Michigan, USA.
M B RabaglinoDepartment of Applied Mathematics and Computer Science, Instituto de Investigación en Ciencias de la Salud, CONICET, Córdoba, Argentina.
P TríbuloDepartment of Animal Sciences, D.H. Barron Reproductive and Perinatal Biology Research Program, and Genetics Institute, University of Florida, Gainesville, Florida, USA.
M HoelkerDepartment of Animal Breeding and Husbandry, Institute of Animal Science, University of Bonn, Bonn, Germany.
G RinconZoetis Inc., Kalamazoo, Michigan, USA.
J J BromfieldDepartment of Animal Sciences, D.H. Barron Reproductive and Perinatal Biology Research Program, and Genetics Institute, University of Florida, Gainesville, Florida, USA.
P J HansenDepartment of Animal Sciences, D.H. Barron Reproductive and Perinatal Biology Research Program, and Genetics Institute, University of Florida, Gainesville, Florida, USA.
University of Florida · USZoetis (United States) · USTechnical University of Denmark · DKUniversity of Bonn · DE

Funding

Sexual dimorphism in developmental programming caused by CSF2R01HD088352 · NICHD · UNIVERSITY OF FLORIDA · PI HANSEN, PETER J. · 2017 to 2021
$1.8M
NICHD NIH HHS R01 HD088352
6 · The paper itself

Abstract

The objective was to identify the transcriptomic profile of in vitro-derived embryos with high competence to establish and maintain gestation. Embryos produced with X-sorted sperm were cultured from day 5 to day 7 in serum-free medium containing 10 ng/ml recombinant bovine colony-stimulating factor 2 (CSF2) or vehicle. The CSF2 was administered because this molecule can increase blastocyst competence for survival after embryo transfer. Blastocysts were harvested on day 7 of culture and manually bisected. One demi-embryo from a single blastocyst was transferred into a synchronized recipient and the other half was used for RNA-seq analysis. Using P < 0.01 and a fold change >2-fold or <0.5 fold as cutoffs, there were 617 differentially expressed genes (DEG) between embryos that survived to day 30 of gestation vs those that did not, 470 DEG between embryos that survived to day 60 and those that did not, 432 DEG between embryos that maintained pregnancy from day 30 to day 60 vs those where pregnancy failed after day 30, and 635 DEG regulated by CSF2. Pathways and ontologies in which DEG were overrepresented included many related to cellular responses to stress and cell survival. It was concluded that gene expression in the blastocyst is different between embryos that are competent to establish and maintain pregnancy vs those that are not. The relationship between expression of genes related to cell stress and subsequent embryonic survival probably reflects cellular perturbations caused by embryonic development taking place in the artificial environment associated with cell culture.

Indexed as

Embryo TransferGene Expression Regulation, DevelopmentalTranscriptomeAnimalsBlastocystCattleCell SurvivalEmbryo Culture TechniquesEmbryonic DevelopmentFemalePregnancySignal TransductionblastocystCSF2embryonic survivalpregnancytranscriptome

Identifiers

PMID31616926
PMCPMC7331872
OpenAlexW2980590951

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.