Evidence map›Paper›PMID 31616390›Full record

ArticleFrontiers in microbiology2019

16S rRNA Gene Amplicon Based Metagenomic Signatures of Rhizobiome Community in Rice Field During Various Growth Stages.

Madangchanok Imchen, Ranjith Kumavath, Aline B M Vaz, Aristóteles Góes-Neto, Debmalya Barh, Preetam Ghosh, Natalia Kozyrovska, Olga Podolich, Vasco Azevedo

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
7.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Germination and Polishing Reshape Microbial Communities inJournal of agricultural and food chemistry · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Madangchanok ImchenDepartment of Genomic Sciences, School of Biological Sciences, Central University of Kerala, Kasaragod, India.
Ranjith KumavathDepartment of Genomic Sciences, School of Biological Sciences, Central University of Kerala, Kasaragod, India.
Aline B M VazMolecular and Computational Biology of Fungi Laboratory, Department of Microbiology, Institute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte, Brazil.
Aristóteles Góes-NetoMolecular and Computational Biology of Fungi Laboratory, Department of Microbiology, Institute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte, Brazil.
Debmalya BarhMolecular and Computational Biology of Fungi Laboratory, Department of Microbiology, Institute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte, Brazil.
Preetam GhoshDepartment of Computer Sciences, Virginia Commonwealth University, Richmond, VA, United States.
Natalia KozyrovskaInstitute of Molecular Biology and Genetics, National Academy of Sciences, Kyiv, Ukraine.
Olga PodolichInstitute of Molecular Biology and Genetics, National Academy of Sciences, Kyiv, Ukraine.
Vasco AzevedoLaboratório de Genética Celular e Molecular, Departamento de Biologia Geral, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Universidade Federal de Minas Gerais · BRCentral University of Kerala · INInstitute of Molecular Biology and Genetics · UAVirginia Commonwealth University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice is a major staple food across the globe. Its growth and productivity is highly dependent on the rhizobiome where crosstalk takes place between plant and the microbial community. Such interactions lead to selective enrichment of plant beneficial microbes which ultimately defines the crop health and productivity. In this study, rhizobiome modulation is documented throughout the development of rice plant. Based on 16S rRNA gene affiliation at genus level, abundance, and diversity of plant growth promoting bacteria increased during the growth stages. The observed α diversity and rhizobiome complexity increased significantly (

Indexed as

16S rRNA gene amplicon metagenomicsenvironmental DNAnext generation sequencingOryza sativarhizobiome

Identifiers

PMID31616390
PMCPMC6764247
OpenAlexW2971352316

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.