Evidence map›Paper›PMID 31615965›Full record

ArticlemBio2019

Rapid Phenotypic and Metabolomic Domestication of Wild

Ina Bodinaku, Jason Shaffer, Allison B Connors, Jacob L Steenwyk, Megan N Biango-Daniels, Erik K Kastman, Antonis Rokas, Albert Robbat, Benjamin E Wolfe

Abstract read
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. A review of recently introducedStudies in mycology · 2024
    Article
  8. Article
  9. Article
  10. Domestication in dry-cured meatEvolutionary applications · 2023
    Article
  11. mSphere · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Comprehensive review on patulin andFrontiers in plant science · 2023
    Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Ina BodinakuTufts University, Department of Biology, Medford, Massachusetts, USA.
Jason ShafferTufts University, Department of Biology, Medford, Massachusetts, USA.
Allison B ConnorsTufts University, Department of Chemistry, Medford, Massachusetts, USA.
Jacob L SteenwykVanderbilt University, Department of Biological Sciences, Nashville, Tennessee, USA.
Megan N Biango-DanielsTufts University, Department of Biology, Medford, Massachusetts, USA.
Erik K KastmanTufts University, Department of Biology, Medford, Massachusetts, USA.
Antonis RokasVanderbilt University, Department of Biological Sciences, Nashville, Tennessee, USA.ORCID 0000-0002-7248-6551
Albert RobbatTufts University, Department of Chemistry, Medford, Massachusetts, USA.
Benjamin E WolfeTufts University, Department of Biology, Medford, Massachusetts, USA benjamin.wolfe@tufts.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fermented foods provide novel ecological opportunities for natural populations of microbes to evolve through successive recolonization of resource-rich substrates. Comparative genomic data have reconstructed the evolutionary histories of microbes adapted to food environments, but experimental studies directly demonstrating the process of domestication are lacking for most fermented food microbes. Here, we show that during adaptation to cheese, phenotypic and metabolomic traits of wild

Indexed as

CheesePenicilliumTranscriptomeVolatile Organic CompoundsVolatile Organic CompoundscheeseevolutionmycotoxinsPenicilliumsecondary metabolismtranscriptomevolatile organic compound

Identifiers

PMID31615965
PMCPMC6794487

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.