Evidence map›Paper›PMID 31615848›Full record

ArticleThe Plant cell2019

Genetic Analyses of the Arabidopsis ATG1 Kinase Complex Reveal Both Kinase-Dependent and Independent Autophagic Routes during Fixed-Carbon Starvation.

Xiao Huang, Chunyan Zheng, Fen Liu, Chao Yang, Ping Zheng, Xing Lu, Jiang Tian, Taijoon Chung, Marisa S Otegui, Shi Xiao and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 136 citations in OpenAlex.

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  17. Autophagy in plants.Autophagy reports · 2024
    Review
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6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Xiao HuangCollege of Life Sciences, South China Agricultural University, Guangzhou 510642, China.ORCID 0000-0002-3724-7440
Chunyan ZhengCollege of Life Sciences, South China Agricultural University, Guangzhou 510642, China.ORCID 0000-0001-7694-9616
Fen LiuDepartment of Biology, Washington University, St. Louis, Missouri 63130.ORCID 0000-0003-2618-7056
Chao YangGuangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Sciences, South China Normal University, Guangzhou 510631, China.ORCID 0000-0002-7277-5142
Ping ZhengCollege of Life Sciences, South China Agricultural University, Guangzhou 510642, China.ORCID 0000-0001-9943-7584
Xing LuRoot Biology Center, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou 510642, China.ORCID 0000-0002-2962-1500
Jiang TianRoot Biology Center, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou 510642, China.ORCID 0000-0002-1104-7803
Taijoon ChungDepartment of Biological Sciences, Pusan National University, Busan 46241, Republic of Korea.ORCID 0000-0002-5318-9105
Marisa S OteguiDepartment of Botany, University of Wisconsin, Madison, Wisconsin 53706.ORCID 0000-0003-4699-6950
Shi XiaoState Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Resources, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.ORCID 0000-0002-6632-8952
Caiji GaoGuangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Sciences, South China Normal University, Guangzhou 510631, China.ORCID 0000-0003-3958-4499
Richard D VierstraDepartment of Biology, Washington University, St. Louis, Missouri 63130 rdvierstra@wustl.edu fqli@scau.edu.cn.ORCID 0000-0003-0210-3516
Faqiang LiCollege of Life Sciences, South China Agricultural University, Guangzhou 510642, China rdvierstra@wustl.edu fqli@scau.edu.cn.ORCID 0000-0003-4117-2450
South China Agricultural University · CNSouth China Normal University · CNPusan National University · KRSun Yat-sen University · CNUniversity of Wisconsin–Madison · USWashington University in St. Louis · US

Funding

Autophagic Clearance of Proteasomes and CDC48 as Models for Amyloidogenic Protein Quality Control.R01GM124452 · NIGMS · WASHINGTON UNIVERSITY · PI JEZ, JOSEPH MARTIN · 2018 to 2025
$2.4M
NIGMS NIH HHS R01 GM124452
6 · The paper itself

Abstract

Under nutrient and energy-limiting conditions, plants up-regulate sophisticated catabolic pathways such as autophagy to remobilize nutrients and restore energy homeostasis. Autophagic flux is tightly regulated under these circumstances through the AuTophaGy-related1 (ATG1) kinase complex, which relays upstream nutrient and energy signals to the downstream components that drive autophagy. Here, we investigated the role(s) of the Arabidopsis (

Indexed as

Ammonium CompoundsArabidopsisArabidopsis ProteinsAutophagyAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsBeclin-1CarbonMembrane ProteinsMitochondrial ProteinsMutationNitrogenPhenotypePhosphatidylinositol 3-KinasesPhosphorylationProtein IsoformsAmmonium CompoundsAPG9 protein, ArabidopsisArabidopsis ProteinsAt3g01090 protein, ArabidopsisAT3G51790 protein, ArabidopsisATG13a protein, ArabidopsisATG13b protein, ArabidopsisAUTOPHAGY-RELATED11 protein, ArabidopsisAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsBeclin-1beclin 1 protein, ArabidopsisCarbonMembrane ProteinsMitochondrial ProteinsNitrogenPhosphatidylinositol 3-KinasesProtein IsoformsProtein KinasesProtein Serine-Threonine KinasesTranscription FactorsVesicular Transport Proteins

Identifiers

PMID31615848
PMCPMC6925010
OpenAlexW2980572854

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.