Evidence map›Paper›PMID 31614967›Full record

ArticleInternational journal of molecular sciences2019

Proteomic Landscape Has Revealed Small Rubber Particles Are Crucial Rubber Biosynthetic Machines for Ethylene-Stimulation in Natural Rubber Production.

Dan Wang, Quanliang Xie, Yong Sun, Zheng Tong, Lili Chang, Li Yu, Xueyan Zhang, Boxuan Yuan, Peng He, Xiang Jin and 4 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Dan WangCollege of Life Sciences, Key Laboratory for Ecology of Tropical Islands, Ministry of Education, Hainan Normal University, Haikou 571158, China. wangdanqz2009@126.com.
Quanliang XieCollege of Life Sciences, Key Laboratory for Ecology of Tropical Islands, Ministry of Education, Hainan Normal University, Haikou 571158, China. xiequanliang001@163.com.
Yong SunRubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou 571737, China. sunyong_03119308@126.com.
Zheng TongInstitute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou 571101, China. tongzheng@itbb.org.cn.
Lili ChangInstitute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou 571101, China. tychang493875@126.com.
Li YuCollege of Life Sciences, Key Laboratory for Ecology of Tropical Islands, Ministry of Education, Hainan Normal University, Haikou 571158, China. yulixjnu@163.com.
Xueyan ZhangCollege of Life Sciences, Key Laboratory for Ecology of Tropical Islands, Ministry of Education, Hainan Normal University, Haikou 571158, China. zhangxueyan_caas@126.com.
Boxuan YuanCollege of Life Sciences, Key Laboratory for Ecology of Tropical Islands, Ministry of Education, Hainan Normal University, Haikou 571158, China. 15830503299@163.com.
Peng HeRubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou 571737, China. penghe1974@163.com.
Xiang JinCollege of Life Sciences, Key Laboratory for Ecology of Tropical Islands, Ministry of Education, Hainan Normal University, Haikou 571158, China. jinx@hainnu.edu.cn.
Yiyang DongCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, China. yydong@mail.buct.edu.cn.
Hongbin LiKey Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, College of Life Sciences, Shihezi University, Shihezi 832003, China. lihbabc@163.com.
Pascal MontoroCIRAD, UMR AGAP, F-34398 Montpellier, France. pascal.montoro@cirad.fr.
Xuchu WangCollege of Life Sciences, Key Laboratory for Ecology of Tropical Islands, Ministry of Education, Hainan Normal University, Haikou 571158, China. xchwang@hainnu.edu.cn.
Shihezi University · CNChinese Academy of Tropical Agricultural Sciences · CNHainan Normal University · CNBeijing University of Chemical Technology · CNCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FR

Funding

National Natural Science Foundation of China 31570301; 31860224Scientific Research Innovation Team Program of Hainan Province 2018CXTD341
6 · The paper itself

Abstract

Rubber particles are a specific organelle for natural rubber biosynthesis (NRB) and storage. Ethylene can significantly improve rubber latex production by increasing the generation of small rubber particles (SRPs), regulating protein accumulation, and activating many enzyme activities. We conducted a quantitative proteomics study of different SRPs upon ethylene stimulation by differential in-gel electrophoresis (DIGE) and using isobaric tags for relative and absolute quantification (iTRAQ) methods. In DIGE, 79 differentially accumulated proteins (DAPs) were determined as ethylene responsive proteins. Our results show that the abundance of many NRB-related proteins has been sharply induced upon ethylene stimulation. Among them, 23 proteins were identified as rubber elongation factor (REF) and small rubber particle protein (SRPP) family members, including 16 REF and 7 SRPP isoforms. Then, 138 unique phosphorylated peptides, containing 129 phosphorylated amino acids from the 64 REF/SRPP family members, were identified, and most serine and threonine were phosphorylated. Furthermore, we identified 226 DAPs from more than 2000 SRP proteins by iTRAQ. Integrative analysis revealed that almost all NRB-related proteins can be detected in SRPs, and many proteins are positively responsive to ethylene stimulation. These results indicate that ethylene may stimulate latex production by regulating the accumulation of some key proteins. The phosphorylation modification of REF and SRPP isoforms might be crucial for NRB, and SRP may act as a complex natural rubber biosynthetic machine.

Indexed as

Amino Acid SequenceAntigens, PlantEthylenesHeveaLatexPlant ProteinsProteomeProteomicsRubberAntigens, PlantethyleneEthylenesLatexPlant ProteinsProteomeREF protein, Hevea brasiliensisRubberSRPP protein, Hevea brasiliensisHevea brasiliensisnatural rubber biosynthesisprotein phosphorylationquantitative proteomicssmall rubber particle

Identifiers

PMID31614967
PMCPMC6829444
OpenAlexW2979543828

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.