Evidence map›Paper›PMID 31614438›Full record

ArticleInternational journal of molecular sciences2019

Systematic Approach to Developing Splice Modulating Antisense Oligonucleotides.

May T Aung-Htut, Craig S McIntosh, Kristin A Ham, Ianthe L Pitout, Loren L Flynn, Kane Greer, Sue Fletcher, Steve D Wilton

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Nucleic acid drugs: recent progress and future perspectives.Signal transduction and targeted therapy · 2024
    Review
  7. Inhibition of survivin by 2'-RSC advances · 2024
    Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. TargetedBiomedicines · 2021
    Article
  14. At the dawn of the transcriptomic medicine.Experimental biology and medicine (Maywood, N.J.) · 2021
    Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

May T Aung-HtutCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, Western 6150, Australia.ORCID 0000-0002-6379-2303
Craig S McIntoshCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, Western 6150, Australia. C.McIntosh@murdoch.edu.au.ORCID 0000-0001-7188-5035
Kristin A HamCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, Western 6150, Australia. Kristin.Ham@murdoch.edu.au.
Ianthe L PitoutCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, Western 6150, Australia. I.pitout@murdoch.edu.au.
Loren L FlynnCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, Western 6150, Australia. Loren.Flynn@murdoch.edu.au.ORCID 0000-0001-5249-547X
Kane GreerCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, Western 6150, Australia. k.greer@murdoch.edu.au.
Sue FletcherCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, Western 6150, Australia. s.fletcher@murdoch.edu.au.
Steve D WiltonCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, Western 6150, Australia. s.wilton@murdoch.edu.au.
Murdoch University · AU

Funding

National Health and Medical Research Council 1144791
6 · The paper itself

Abstract

The process of pre-mRNA splicing is a common and fundamental step in the expression of most human genes. Alternative splicing, whereby different splice motifs and sites are recognised in a developmental and/or tissue-specific manner, contributes to genetic plasticity and diversity of gene expression. Redirecting pre-mRNA processing of various genes has now been validated as a viable clinical therapeutic strategy, providing treatments for Duchenne muscular dystrophy (inducing specific exon skipping) and spinal muscular atrophy (promoting exon retention). We have designed and evaluated over 5000 different antisense oligonucleotides to alter splicing of a variety of pre-mRNAs, from the longest known human pre-mRNA to shorter, exon-dense primary gene transcripts. Here, we present our guidelines for designing, evaluating and optimising splice switching antisense oligomers in vitro. These systematic approaches assess several critical factors such as the selection of target splicing motifs, choice of cells, various delivery reagents and crucial aspects of validating assays for the screening of antisense oligonucleotides composed of 2'-

Indexed as

Alternative SplicingAnimalsCell LineDrug DesignGuidelines as TopicHEK293 CellsHumansOligonucleotides, AntisenseRNA PrecursorsOligonucleotides, AntisenseRNA Precursors2′-O-Methylantisense oligonucleotidesplice modulationtransfection

Identifiers

PMID31614438
PMCPMC6834167
OpenAlexW2980074084

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.