Evidence map›Paper›PMID 31611708›Full record

ArticleNature neuroscience2019

Profiling the mouse brain endothelial transcriptome in health and disease models reveals a core blood-brain barrier dysfunction module.

Roeben Nocon Munji, Allison Luen Soung, Geoffrey Aaron Weiner, Fabien Sohet, Bridgette Deanne Semple, Alpa Trivedi, Kayleen Gimlin, Masakazu Kotoda, Masaaki Korai, Sidar Aydin and 7 more

Abstract read
In one paragraph

Article in Nature neuroscience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 209 papers.

0numbers the graph read from it
0cells of the map it votes in
209citing papers in PubMed
18.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

209 citing papers in PubMed, 333 citations in OpenAlex.

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  11. Glycocalyx and basal lamina in neurological disorders.Matrix biology : journal of the International Society for Matrix Biology · 2026
    Review
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  15. Article
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  19. Article
  20. Development of the blood-brain barrier.Development (Cambridge, England) · 2026
    Review

149 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Roeben Nocon Munji *Departments of Pharmacology and Neurosciences, University of California, San Diego, San Diego, CA, USA.ORCID http://orcid.org/0000-0003-1313-8968
Allison Luen Soung *Departments of Pharmacology and Neurosciences, University of California, San Diego, San Diego, CA, USA.ORCID http://orcid.org/0000-0002-1590-6038
Geoffrey Aaron WeinerDepartments of Pharmacology and Neurosciences, University of California, San Diego, San Diego, CA, USA.ORCID http://orcid.org/0000-0002-3651-5976
Fabien SohetDepartments of Pharmacology and Neurosciences, University of California, San Diego, San Diego, CA, USA.
Bridgette Deanne SempleDepartment of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
Alpa TrivediDepartment of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
Kayleen GimlinDepartment of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
Masakazu KotodaDepartment of Neurosurgery and Neurobiology, Barrow Aneurysm and AVM Research Center, Barrow Neurological Institute, Phoenix, AZ, USA.
Masaaki KoraiDepartment of Neurosurgery and Neurobiology, Barrow Aneurysm and AVM Research Center, Barrow Neurological Institute, Phoenix, AZ, USA.
Sidar AydinDepartments of Pharmacology and Neurosciences, University of California, San Diego, San Diego, CA, USA.
Austin BatugalDepartments of Pharmacology and Neurosciences, University of California, San Diego, San Diego, CA, USA.
Anne Christelle CabangcalaDepartments of Pharmacology and Neurosciences, University of California, San Diego, San Diego, CA, USA.
Patrick Georg SchuppDepartment of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
Michael Clark OldhamDepartment of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0001-7633-6932
Tomoki HashimotoDepartment of Neurosurgery and Neurobiology, Barrow Aneurysm and AVM Research Center, Barrow Neurological Institute, Phoenix, AZ, USA.
Linda J Noble-HaeussleinDepartment of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
Richard DanemanDepartments of Pharmacology and Neurosciences, University of California, San Diego, San Diego, CA, USA. Rdaneman@ucsd.edu.ORCID http://orcid.org/0000-0002-7749-6353
University of California San Diego · USUniversity of California, San Francisco · USBarrow Neurological Institute · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007198 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHI, NEIL C, INSEL, PAUL A · 1985 to 2024
$29.3M
CLINICAL, PHARMACOLOGY, DRUG ACTION &PHARMACOKINETICST32GM007546 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Radojka Savic · 1985 to 2026
$8.9M
Training Program in Translational Brain Tumor ResearchT32CA151022 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joseph F Costello · 2010 to 2026
$6.6M
Comprehensive Anesthesia Research TrainingT32GM008440 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Judith Hellman · 1996 to 2026
$5.5M
Intracranial Aneurysm Pathogenesis-Roles of Vascular Remodeling and InflammationR01NS055876 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HASHIMOTO, TOMOKI · 2007 to 2015
$3.0M
Trauma to Developing Brain-Injury and Repair MechanismsR01NS050159 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NOBLE, LINDA J. · 2005 to 2013
$2.8M
Decoding the molecular basis of cellular identity in the human brainR01MH113896 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI OLDHAM, MICHAEL CLARK · 2018 to 2022
$2.0M
Regulation of blood-brain barrier formation and function by EHDsR01NS091281 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DANEMAN, RICHARD · 2015 to 2019
$1.9M
The Role of Mast Cells in the Pathophysiology of Intracranial AneurysmR01NS082280 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HASHIMOTO, TOMOKI · 2013 to 2017
$1.7M
Determinants of vulnerability and recovery after trauma to the developing brainR01NS077767 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NOBLE, LINDA J. · 2012 to 2016
$1.7M
NCI NIH HHS T32 CA151022NIGMS NIH HHS T32 GM007198NIGMS NIH HHS T32 GM007546NIGMS NIH HHS T32 GM008440NIMH NIH HHS R01 MH113896NINDS NIH HHS R01 NS050159NINDS NIH HHS R01 NS055876NINDS NIH HHS R01 NS077767NINDS NIH HHS R01 NS082280NINDS NIH HHS R01 NS091281
6 · The paper itself

Abstract

Blood vessels in the CNS form a specialized and critical structure, the blood-brain barrier (BBB). We present a resource to understand the molecular mechanisms that regulate BBB function in health and dysfunction during disease. Using endothelial cell enrichment and RNA sequencing, we analyzed the gene expression of endothelial cells in mice, comparing brain endothelial cells with peripheral endothelial cells. We also assessed the regulation of CNS endothelial gene expression in models of stroke, multiple sclerosis, traumatic brain injury and seizure, each having profound BBB disruption. We found that although each is caused by a distinct trigger, they exhibit strikingly similar endothelial gene expression changes during BBB disruption, comprising a core BBB dysfunction module that shifts the CNS endothelial cells into a peripheral endothelial cell-like state. The identification of a common pathway for BBB dysfunction suggests that targeting therapeutic agents to limit it may be effective across multiple neurological disorders.

Indexed as

AnimalsBiotinBlood-Brain BarrierBrainBrain Injuries, TraumaticEndothelial CellsInfarction, Middle Cerebral ArteryKainic AcidMiceMice, TransgenicMultiple SclerosisMyelin-Oligodendrocyte GlycoproteinPeptide FragmentsPermeabilityPertussis ToxinSeizuresBiotinKainic AcidMyelin-Oligodendrocyte Glycoproteinmyelin oligodendrocyte glycoprotein (35-50), Ala(37)-Peptide FragmentsPertussis Toxin

Identifiers

PMID31611708
PMCPMC6858546
OpenAlexW2979370432

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.