Evidence map›Paper›PMID 31611699›Full record

ArticleNature immunology2019

Slow phosphorylation of a tyrosine residue in LAT optimizes T cell ligand discrimination.

Wan-Lin Lo, Neel H Shah, Sara A Rubin, Weiguo Zhang, Veronika Horkova, Ian R Fallahee, Ondrej Stepanek, Leonard I Zon, John Kuriyan, Arthur Weiss

Abstract read
In one paragraph

Article in Nature immunology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 1 synthesis or guideline pooled it, 109 citations in OpenAlex.

  1. Pooled it
  2. LAT condensation gates PLCγ1 activation via bimodal LAT phosphorylation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. BTK autoinhibition analyzed by high-throughput swaps of SH2 domains.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Parallel reactions on a single T cell receptor offer a robust kinetic proofreading mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 8 institutions in 2 countries.

Wan-Lin LoDivision of Rheumatology, Rosalind Russell and Ephraim P. Engleman Arthritis Research Center, Department of Medicine, University of California, San Francisco, San Francisco, CA, USA.
Neel H ShahDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-1186-0626
Sara A RubinHarvard Stem Cell Institute, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-3484-5461
Weiguo ZhangDepartment of Immunology, Duke University Medical Center, Durham, NC, USA.
Veronika HorkovaInstitute of Molecular Genetics of the Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0002-3679-2236
Ian R FallaheeDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Ondrej StepanekInstitute of Molecular Genetics of the Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0002-2735-3311
Leonard I ZonHarvard Stem Cell Institute, Harvard University, Cambridge, MA, USA.
John KuriyanDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Arthur WeissDivision of Rheumatology, Rosalind Russell and Ephraim P. Engleman Arthritis Research Center, Department of Medicine, University of California, San Francisco, San Francisco, CA, USA. art.weiss@ucsf.edu.ORCID http://orcid.org/0000-0002-2414-9024
Czech Academy of Sciences, Institute of Molecular Genetics · CZHoward Hughes Medical Institute · USArthritis Foundation · USColumbia University · USDuke Medical Center · USHarvard University · USUniversity of California, Berkeley · USUniversity of California, San Francisco · US

Funding

Understand the metabolic fitness of naïve T cellsP01AI091580 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JEROEN ROOSE · 2011 to 2026
$31.1M
Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI VAISSE, CHRISTIAN · 2003 to 2019
$21.8M
A Community Zebrafish Resource for Modeling GWAS BiologyR24OD017870 · OD · BRIGHAM AND WOMEN'S HOSPITAL · PI GOESSLING, WOLFRAM, MACRAE, CALUM A. · 2014 to 2021
$6.3M
Project-002U54DK110805 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI ORKIN, STUART H, ZON, LEONARD IRA · 2016 to 2020
$5.9M
The cell and molecular mechanisms underlying CD28 costimulationR37AI114575 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WEISS, ARTHUR · 2016 to 2023
$3.2M
NIAID NIH HHS P01 AI091580NIAID NIH HHS R37 AI114575NIDDK NIH HHS P30 DK063720NIDDK NIH HHS U54 DK110805NIH HHS R24 OD017870
6 · The paper itself

Abstract

Self-non-self discrimination is central to T cell-mediated immunity. The kinetic proofreading model can explain T cell antigen receptor (TCR) ligand discrimination; however, the rate-limiting steps have not been identified. Here, we show that tyrosine phosphorylation of the T cell adapter protein LAT at position Y132 is a critical kinetic bottleneck for ligand discrimination. LAT phosphorylation at Y132, mediated by the kinase ZAP-70, leads to the recruitment and activation of phospholipase C-γ1 (PLC-γ1), an important effector molecule for T cell activation. The slow phosphorylation of Y132, relative to other phosphosites on LAT, is governed by a preceding glycine residue (G131) but can be accelerated by substituting this glycine with aspartate or glutamate. Acceleration of Y132 phosphorylation increases the speed and magnitude of PLC-γ1 activation and enhances T cell sensitivity to weaker stimuli, including weak agonists and self-peptides. These observations suggest that the slow phosphorylation of Y132 acts as a proofreading step to facilitate T cell ligand discrimination.

Indexed as

Lymphocyte ActivationAdaptor Proteins, Signal TransducingAnimalsFemaleLigandsMaleMembrane ProteinsMicePhospholipase C gammaPhosphorylationReceptors, Antigen, T-CellT-LymphocytesTyrosineZAP-70 Protein-Tyrosine KinaseAdaptor Proteins, Signal TransducingLat protein, mouseLigandsMembrane ProteinsPhospholipase C gammaPlcg1 protein, mouseReceptors, Antigen, T-CellTyrosineZap70 protein, mouseZAP-70 Protein-Tyrosine Kinase

Identifiers

PMID31611699
PMCPMC6858552
OpenAlexW2980210077

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.