Evidence map›Paper›PMID 31611642›Full record

ArticleNature microbiology2019

Evasion of autophagy mediated by Rickettsia surface protein OmpB is critical for virulence.

Patrik Engström, Thomas P Burke, Gabriel Mitchell, Nadia Ingabire, Kevin G Mark, Guillaume Golovkine, Anthony T Iavarone, Michael Rape, Jeffery S Cox, Matthew D Welch

Abstract read
In one paragraph

Article in Nature microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed, 1 pooled it
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 1 synthesis or guideline pooled it, 84 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Review
  6. Proximity labeling of thebioRxiv : the preprint server for biology · 2026
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  19. Article
  20. Review

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Patrik EngströmDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA. pengstrom@berkeley.edu.ORCID http://orcid.org/0000-0003-3092-8216
Thomas P BurkeDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Gabriel MitchellDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.ORCID http://orcid.org/0000-0001-7977-5316
Nadia IngabireDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Kevin G MarkDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Guillaume GolovkineDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Anthony T IavaroneQB3/Chemistry Mass Spectrometry Facility, University of California, Berkeley, CA, USA.
Michael RapeDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Jeffery S CoxDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Matthew D WelchDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA. welch@berkeley.edu.ORCID http://orcid.org/0000-0003-2537-6349
University of California, Berkeley · USHoward Hughes Medical Institute · USThe University of Texas at Austin · US

Funding

The role of Listeria cyclic-di-AMP during infection and immunityP01AI063302 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI COX, JEFFERY S · 2004 to 2025
$45.5M
MARC/Biomedical Research and Training Program at the University of ArizonaT34GM008718 · NIGMS · UNIVERSITY OF ARIZONA · PI MIRANDA, KATRINA M. · 1999 to 2021
$8.6M
Rickettsia mobilization of the cytoskeleton during invasion, motility, and spreadR01AI109044 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI WELCH, MATTHEW D · 2014 to 2025
$5.6M
Discovery of novel, ubiquitin-regulated mechanisms of TB control by macrophagesR01AI120694 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COX, JEFFERY S, KROGAN, NEVAN J · 2015 to 2019
$3.3M
High Definition Ion Mobility SpectrometerS10OD020062 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI WILLIAMS, EVAN R · 2015 to 2015
$590k
Exploring the role of type I interferon in Rickettsia pathogenesisR21AI138550 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI WELCH, MATTHEW D · 2019 to 2020
$432k
Role of Ubiquitination in Neurocristopathies and Neural Crest-Derived CancersF32GM120956 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI MARK, KEVIN · 2016 to 2018
$174k
NIAID NIH HHS P01 AI063302NIAID NIH HHS R01 AI109044NIAID NIH HHS R01 AI120694NIAID NIH HHS R21 AI138550NIGMS NIH HHS F32 GM120956NIGMS NIH HHS T34 GM008718NIH HHS S10 OD020062U.S. Department of Health & Human Services | NIH | NIH Office of the Director (OD) S10 OD020062-01
6 · The paper itself

Abstract

Rickettsia are obligate intracellular bacteria that evade antimicrobial autophagy in the host cell cytosol by unknown mechanisms. Other cytosolic pathogens block different steps of autophagy targeting, including the initial step of polyubiquitin-coat formation. One mechanism of evasion is to mobilize actin to the bacterial surface. Here, we show that actin mobilization is insufficient to block autophagy recognition of the pathogen Rickettsia parkeri. Instead, R. parkeri employs outer membrane protein B (OmpB) to block ubiquitylation of the bacterial surface proteins, including OmpA, and subsequent recognition by autophagy receptors. OmpB is also required for the formation of a capsule-like layer. Although OmpB is dispensable for bacterial growth in endothelial cells, it is essential for R. parkeri to block autophagy in macrophages and to colonize mice because of its ability to promote autophagy evasion in immune cells. Our results indicate that OmpB acts as a protective shield to obstruct autophagy recognition, thereby revealing a distinctive bacterial mechanism to evade antimicrobial autophagy.

Indexed as

Immune EvasionA549 CellsAnimalsAutophagyBacterial Outer Membrane ProteinsCell LineChlorocebus aethiopsCytosolDisease Models, AnimalEndothelial CellsFemaleGene Knockout TechniquesHumansMacrophagesMiceMice, Inbred C57BLBacterial Outer Membrane ProteinsMap1lc3b protein, mouseMicrotubule-Associated ProteinsOMPA outer membrane proteinsPolyubiquitin

Identifiers

PMID31611642
PMCPMC6988571
OpenAlexW2979601009

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.