Evidence map›Paper›PMID 31611290›Full record

ArticleJournal of bacteriology2019

Under Elevated c-di-GMP in Escherichia coli, YcgR Alters Flagellar Motor Bias and Speed Sequentially, with Additional Negative Control of the Flagellar Regulon via the Adaptor Protein RssB.

Vincent Nieto, Jonathan D Partridge, Geoffrey B Severin, Run-Zhi Lai, Christopher M Waters, John S Parkinson, Rasika M Harshey

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. bioRxiv : the preprint server for biology · 2026
    Article
  3. Matrine Restores Porcine-Origin β-Lactam-ResistantAntibiotics (Basel, Switzerland) · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. International journal of molecular sciences · 2024
    Article
  14. Journal of bacteriology · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Vincent Nieto *Department of Molecular Biosciences, University of Texas at Austin, Austin, Texas, USA.
Jonathan D Partridge *Department of Molecular Biosciences, University of Texas at Austin, Austin, Texas, USA j.partridge@utexas.edu rasika@austin.utexas.edu.
Geoffrey B SeverinDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.
Run-Zhi LaiBiology Department, University of Utah, Salt Lake City, Utah, USA.
Christopher M WatersDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.
John S ParkinsonBiology Department, University of Utah, Salt Lake City, Utah, USA.ORCID 0000-0001-8788-7844
Rasika M HarsheyDepartment of Molecular Biosciences, University of Texas at Austin, Austin, Texas, USA j.partridge@utexas.edu rasika@austin.utexas.edu.
The University of Texas at Austin · USMichigan State University · USUniversity of Utah · US

Funding

Intracellular Signaling by Bacterial ChemoreceptorsR01GM019559 · NIGMS · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI JOHN S PARKINSON · 1985 to 2026
$12.3M
Virus-host interactions and microbial ecologyR35GM118085 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI HARSHEY, RASIKA M · 2016 to 2025
$5.6M
From structure to systems: Understanding cyclic di-GMP control of transcriptionR01GM109259 · NIGMS · MICHIGAN STATE UNIVERSITY · PI WATERS, CHRISTOPHER M · 2015 to 2019
$2.0M
INTRACELLULAR SIGNALING BY BACTERIAL CHEMORECEPTORSR37GM019559 · NIGMS · UNIVERSITY OF UTAH · PI PARKINSON, JOHN S · 1992 to 2001
$806k
NIGMS NIH HHS R01 GM019559NIGMS NIH HHS R01 GM109259NIGMS NIH HHS R35 GM118085NIGMS NIH HHS R37 GM019559
6 · The paper itself

Abstract

In

Indexed as

Cyclic GMPDNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsFlagellaGene Expression Regulation, BacterialRegulonTranscription Factorsbis(3',5')-cyclic diguanylic acidCyclic GMPDNA-Binding ProteinsEscherichia coli ProteinsrssB protein, E coliTranscription FactorsYcgR protein, E colic-di-GMPcelluloseEscherichia coliflagellar gene regulationflagellar motorRpoSRssBSalmonellaYcgR

Identifiers

PMID31611290
PMCPMC6932234
OpenAlexW2980589945

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.