Evidence map›Paper›PMID 31608767›Full record

ReviewJournal of neurotrauma2020

FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research.

Karim Fouad, John L Bixby, Alison Callahan, Jeffrey S Grethe, Lyn B Jakeman, Vance P Lemmon, David S K Magnuson, Maryann E Martone, Jessica L Nielson, Jan M Schwab and 5 more

Abstract readReview
In one paragraph

Review in Journal of neurotrauma, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Bridging the gap: a translational perspective in spinal cord injury.Experimental biology and medicine (Maywood, N.J.) · 2024
    Review
  10. Increasing Rigor of Preclinical Research to Maximize Opportunities for Translation.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Karim FouadFaculty of Rehabilitation Medicine and Institute for Neuroscience and Mental Health, University of Alberta, Edmonton, Alberta, Canada.
John L BixbyMiami Project to Cure Paralysis, Department of Neurological Surgery and Department of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, Florida.
Alison CallahanCenter for Biomedical Informatics Research, Stanford University School of Medicine, Stanford, California.
Jeffrey S GretheCenter for Research in Biological Systems, University of California San Diego, San Diego, California.
Lyn B JakemanDivision of Neuroscience, National Institute of Neurological Disorders and Stroke, The National Institutes of Health, Rockville, Maryland.
Vance P LemmonMiami Project to Cure Paralysis, Department of Neurological Surgery and Department of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, Florida.
David S K MagnusonKentucky Spinal Cord Injury Research Center, Department of Neurological Surgery, Anatomical Sciences and Neurobiology and Department of Physiology, University of Louisville, Louisville, Kentucky.
Maryann E MartoneDepartment of Neuroscience, University of California San Diego, San Diego, California.
Jessica L NielsonDepartment of Psychiatry, Institute of Health Informatics, University of Minnesota Medical School, Minneapolis, Minnesota.
Jan M SchwabBelford Center for Spinal Cord Injury, Spinal Cord Injury Division (Paraplegiology), Department of Neurology and Discovery Theme Initiative of the Ohio State University (Chronic Brain Injury), The Ohio State University, Columbus, Ohio.
Carol Taylor-BurdsDivision of Neuroscience, National Institute of Neurological Disorders and Stroke, The National Institutes of Health, Rockville, Maryland.
Wolfram TetzlaffDepartment of International Collaboration on Repair Discoveries (ICORD), The University of British Columbia, Vancouver, British Columbia, Canada.
Abel Torres-EspinDepartment of Neurological Surgery, Brain and Spinal Injury Center, University of California San Francisco, San Francisco, California.
Adam R FergusonDepartment of Neurological Surgery, Brain and Spinal Injury Center, University of California San Francisco, San Francisco, California.
FAIR-SCI Ahead Workshop Participants

Funding

University of Minnesota Clinical and Translational Science Institute (UMN CTSI)UL1TR002494 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R, WEISDORF, DANIEL J · 2018 to 2022
$34.9M
Bioinformatics for post-traumatic stressR01MH116156 · NIMH · UNIVERSITY OF MINNESOTA · PI NIELSON, JESSICA LEIGH · 2018 to 2022
$2.6M
Reducing Infection Susceptibility by Immune Function Restoration in Spinal Cord InjuryR01NS118200 · NINDS · OHIO STATE UNIVERSITY · PI SCHWAB, JAN · 2020 to 2024
$1.9M
Maladaptive Plasticity in Spinal Cord Injury: Cellular MechanismsR01NS088475 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERGUSON, ADAM R · 2015 to 2019
$1.7M
Translational Outcomes Project: Visualizing Syndromic Information and Outcomes for Neurotrauma (TOP-VISION)UH3NS106899 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BEATTIE, MICHAEL S, BRESNAHAN, JACQUELINE C · 2020 to 2022
$1.2M
Translational Outcomes Project: Visualizing Syndromic Information and Outcomes for Neurotrauma (TOP-VISION)UG3NS106899 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BEATTIE, MICHAEL S, BRESNAHAN, JACQUELINE C · 2018 to 2019
$480k
SCI Consortium Study: Harnessing big-data for plasticity and rehabilitation in translational SCII01RX002245 · VA · VETERANS AFFAIRS MED CTR SAN FRANCISCO · PI ADAM R FERGUSON · 2017 to 2026
–
Leveraging data-science for discovery in chronic TBII01RX002787 · VA · VETERANS AFFAIRS MED CTR SAN FRANCISCO · PI FERGUSON, ADAM R · 2018 to 2025
–
NCATS NIH HHS UL1 TR002494NIMH NIH HHS R01 MH116156NINDS NIH HHS R01 NS088475NINDS NIH HHS R01 NS118200NINDS NIH HHS UG3 NS106899NINDS NIH HHS UH3 NS106899RRD VA I01 RX002245RRD VA I01 RX002787
6 · The paper itself

Abstract

Over the last 5 years, multiple stakeholders in the field of spinal cord injury (SCI) research have initiated efforts to promote publications standards and enable sharing of experimental data. In 2016, the National Institutes of Health/National Institute of Neurological Disorders and Stroke hosted representatives from the SCI community to streamline these efforts and discuss the future of data sharing in the field according to the FAIR (Findable, Accessible, Interoperable and Reusable) data stewardship principles. As a next step, a multi-stakeholder group hosted a 2017 symposium in Washington, DC entitled "FAIR SCI Ahead: the Evolution of the Open Data Commons for Spinal Cord Injury research." The goal of this meeting was to receive feedback from the community regarding infrastructure, policies, and organization of a community-governed Open Data Commons (ODC) for pre-clinical SCI research. Here, we summarize the policy outcomes of this meeting and report on progress implementing these policies in the form of a digital ecosystem: the Open Data Commons for Spinal Cord Injury (ODC-SCI.org). ODC-SCI enables data management, harmonization, and controlled sharing of data in a manner consistent with the well-established norms of scholarly publication. Specifically, ODC-SCI is organized around virtual "laboratories" with the ability to share data within each of three distinct data-sharing spaces: within the laboratory, across verified laboratories, or publicly under a creative commons license (CC-BY 4.0) with a digital object identifier that enables data citation. The ODC-SCI implements FAIR data sharing and enables pooled data-driven discovery while crediting the generators of valuable SCI data.

Indexed as

Disease Models, AnimalAnimalsBiomedical ResearchHumansInformation DisseminationInformation Storage and RetrievalSpinal Cord Injuriescommunity-based repositorydata sharingFAIR dataODC-SCIspinal cord injury

Identifiers

PMID31608767
PMCPMC7071068

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.