Evidence map›Paper›PMID 31606248›Full record

ArticleNeuron2019

Pum2 Shapes the Transcriptome in Developing Axons through Retention of Target mRNAs in the Cell Body.

José C Martínez, Lisa K Randolph, Daniel Maxim Iascone, Helena F Pernice, Franck Polleux, Ulrich Hengst

Open access · bronzeAbstract read
In one paragraph

Article in Neuron, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. SENP1 inhibits aerobic glycolysis in AβCell biology and toxicology · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Control of Selective mRNA Translation in Neuronal Subcellular Compartments in Health and Disease.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

José C MartínezMedical Scientist Training Program, Columbia University Irving Medical Center, New York, NY 10032, USA; The Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA.
Lisa K RandolphThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA; Doctoral Program in Neurobiology and Behavior, Columbia University, New York, NY 10027, USA.
Daniel Maxim IasconeDoctoral Program in Neurobiology and Behavior, Columbia University, New York, NY 10027, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA.
Helena F PerniceThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA; Department of Anatomy and Cell Biology, Biomedical Center, Medical Faculty, Ludwig Maximilians University, 82152 Planegg-Martinsried, Germany.
Franck PolleuxMortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA; Department of Neuroscience, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY 10027, USA; Kavli Institute for Brain Science, Columbia University, New York, NY 10027, USA.
Ulrich HengstThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA; Department of Pathology and Cell Biology, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA. Electronic address: uh2112@cumc.columbia.edu.
Columbia University · USColumbia University Irving Medical Center · US

Funding

NEUROBIOLOGY AND BEHAVIOR RESEARCH TRAINING PROGRAMT32HD007430 · NICHD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GRUEBER, WESLEY B · 1999 to 2017
$6.8M
ADVANCED GRADUATE TRAINING PROGRAM IN NEUROBIOLOGY & BEHAVIORT32NS064928 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HENGST, ULRICH · 2010 to 2024
$3.0M
Intra-axonal signaling pathways triggered by attractive guidance cues.R01MH096702 · NIMH · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HENGST, ULRICH · 2012 to 2016
$2.1M
A kinase pathway required for terminal axon branching and presynaptic functionR01NS089456 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI POLLEUX, FRANCK · 2014 to 2017
$1.6M
Post-transcriptional regulation of Snap25 by Pumilio proteins in synaptogenesisF31NS113574 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI RANDOLPH, LISA KATHRYN · 2019 to 2021
$137k
Role of regulated mRNA degradation in the control of axonal mRNA localization and translation.F31GM116617 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MARTINEZ, JOSE CARLOS · 2015 to 2017
$131k
Whole-neuron structural input mapping of SRGAP2 regulation of synaptic developmentF31NS101820 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI IASCONE, DANIEL MAXIM · 2017 to 2017
$44k
NICHD NIH HHS T32 HD007430NIGMS NIH HHS F31 GM116617NIMH NIH HHS R01 MH096702NINDS NIH HHS F31 NS101820NINDS NIH HHS F31 NS113574NINDS NIH HHS R01 NS089456NINDS NIH HHS T32 NS064928
6 · The paper itself

Abstract

Localized protein synthesis is fundamental for neuronal development, maintenance, and function. Transcriptomes in axons and soma are distinct, but the mechanisms governing the composition of axonal transcriptomes and their developmental regulation are only partially understood. We found that the binding motif for the RNA-binding proteins Pumilio 1 and 2 (Pum1 and Pum2) is underrepresented in transcriptomes of developing axons. Introduction of Pumilio-binding elements (PBEs) into mRNAs containing a β-actin zipcode prevented axonal localization and translation. Pum2 is restricted to the soma of developing neurons, and Pum2 knockdown or blocking its binding to mRNA caused the appearance and translation of PBE-containing mRNAs in axons. Pum2-deficient neurons exhibited axonal growth and branching defects in vivo and impaired axon regeneration in vitro. These results reveal that Pum2 shapes axonal transcriptomes by preventing the transport of PBE-containing mRNAs into axons, and they identify somatic mRNAs retention as a mechanism for the temporal control of intra-axonal protein synthesis.

Indexed as

AnimalsAxonsCell BodyCells, CulturedMiceMice, Inbred C57BLNeurogenesisProtein BiosynthesisRatsRats, Sprague-DawleyRNA-Binding ProteinsRNA, MessengerTranscriptomeRNA-Binding ProteinsRNA, Messengeraxonal transcriptomeaxon development and regenerationlocal protein synthesislocked nucleic acidsmRNA localizationPumiliozipcodes

Identifiers

PMID31606248
PMCPMC6895424
OpenAlexW2979813145

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.