Evidence map›Paper›PMID 31606075›Full record

ArticleMethods in enzymology2019

Utilizing intein trans-splicing for in vivo generation of site-specifically modified proteins.

Igor Maksimovic, Devin Ray, Qingfei Zheng, Yael David

Abstract read
In one paragraph

Article in Methods in enzymology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Igor MaksimovicTri-Institutional PhD Program in Chemical Biology, New York, NY, United States; Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, United States.
Devin RayTri-Institutional PhD Program in Chemical Biology, New York, NY, United States; Tri-Institutional MD-PhD Program, New York, NY, United States; Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, United States.
Qingfei ZhengChemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, United States.
Yael DavidTri-Institutional PhD Program in Chemical Biology, New York, NY, United States; Tri-Institutional MD-PhD Program, New York, NY, United States; Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, United States; Department of Pharmacology, Weill Cornell Medical College, New York, NY, United States; Department of Physiology, Biophysics and Systems Biology, Weill Cornell Medical College, New York, NY, United States. Electronic address: davidshy@mskcc.org.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Tri-Institutional PhD Program in Chemical BiologyT32GM115327 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI TAN, DEREK S · 2015 to 2019
$741k
Application of intein-based chemical methods to directly manipulate neuronal histone modifications in rodent models of addictionR21DA044767 · NIDA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DAVID-SHTERNBERG, YAEL E, MAZE, IAN S. · 2018 to 2019
$444k
NCI NIH HHS P30 CA008748NIDA NIH HHS R21 DA044767NIGMS NIH HHS T32 GM007739NIGMS NIH HHS T32 GM115327
6 · The paper itself

Abstract

Many cellular processes as well as their associated pathologies are regulated by protein post-translational modifications (PTMs). Understanding the precise roles of these adducts hinges on the development of methods to robustly and site-specifically manipulate proteins in their physiological environments. Recently, ultrafast intein protein trans-splicing (PTS) was harnessed to incorporate site-specific modifications on cellular chromatin in live cells. In this chapter, we present the protocols for the generation of synthetic modifications on native chromatin as well as highlight the capabilities of this methodology.

Indexed as

InteinsTrans-SplicingChromatinChromatin Assembly and DisassemblyFluorescent DyesHEK293 CellsHistonesHumansProtein EngineeringChromatinFluorescent DyesHistonesChemical biologyChromatin remodelingProtein engineeringUltrafast split inteins

Identifiers

PMID31606075
PMCPMC8080263

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.