Evidence map›Paper›PMID 31605027›Full record

ArticleThe Journal of antibiotics2020

Structure elucidation and biosynthetic locus of trinickiabactin from the plant pathogenic bacterium Trinickia caryophylli.

Junjing Jiao, Jiayi Du, Andri Frediansyah, Ghazaleh Jahanshah, Harald Gross

Abstract read
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Article in The Journal of antibiotics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Structural and Functional Siderophore Remodeling by Enzymatic Delipidation.Angewandte Chemie (International ed. in English) · 2026
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  4. Genome Sequences of the TwoMicrobiology resource announcements · 2023
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  5. Polyyne-producingFrontiers in microbiology · 2023
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  7. Mitigation ofScience advances · 2021
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  8. Article
  9. Draft Genome Sequence ofMicrobiology resource announcements · 2020
    Article
  10. Draft Genome Sequences of Six Type Strains of the GenusMicrobiology resource announcements · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Junjing JiaoPharmaceutical Institute, Department of Pharmaceutical Biology, University of Tübingen, Tübingen, Germany.
Jiayi DuPharmaceutical Institute, Department of Pharmaceutical Biology, University of Tübingen, Tübingen, Germany.
Andri FrediansyahPharmaceutical Institute, Department of Pharmaceutical Biology, University of Tübingen, Tübingen, Germany.
Ghazaleh JahanshahPharmaceutical Institute, Department of Pharmaceutical Biology, University of Tübingen, Tübingen, Germany.
Harald GrossPharmaceutical Institute, Department of Pharmaceutical Biology, University of Tübingen, Tübingen, Germany. harald.gross@uni-tuebingen.de.ORCID http://orcid.org/0000-0002-0731-821X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Within the framework of our effort to discover new bioactive metabolites from Gram-negative bacteria, trinickiabactin (1) was isolated from the plant pathogenic strain Trinickia caryophylli DSM 50341. Whole genome sequencing allowed the identification of its biosynthetic gene cluster. The structure of 1 bears a rare diazeniumdiolate ligand system and was elucidated by a combination of NMR- and MS-spectroscopic techniques and bioinformatics. Trinickiabactin was found to be antibacterial toward several Gram-negative bacteria (MIC values ranged from 3.5 to 34.0 µg ml

Indexed as

Anti-Bacterial AgentsComputer SimulationDrug DiscoveryGram-Negative BacteriaMagnetic Resonance SpectroscopyMicrobial Sensitivity TestsMultigene FamilyPlant DiseasesProteobacteriaAnti-Bacterial Agents

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.