Evidence map›Paper›PMID 31604963›Full record

ArticleScientific reports2019

Quantitative Histopathology of Stained Tissues using Color Spatial Light Interference Microscopy (cSLIM).

Hassaan Majeed, Adib Keikhosravi, Mikhail E Kandel, Tan H Nguyen, Yuming Liu, Andre Kajdacsy-Balla, Krishnarao Tangella, Kevin W Eliceiri, Gabriel Popescu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 3 citations in OpenAlex.

  1. Pooled it
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  5. Thiacloprid impairs reproductive functions of male Wistar rats.Naunyn-Schmiedeberg's archives of pharmacology · 2024
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  8. Roadmap on Label-Free Super-Resolution Imaging.Laser & photonics reviews · 2023
    Article
  9. Digital staining facilitates biomedical microscopy.Frontiers in bioinformatics · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Reproductive outcomes predicted by phase imaging with computational specificity of spermatozoon ultrastructure.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Hassaan MajeedQuantitative Light Imaging (QLI) Lab, Department of Bioengineering, Beckman Institute of Advanced Science and Technology, University of Illinois at Urbana Champaign, 405 N. Matthews, Urbana, IL, 61801, USA.
Adib KeikhosraviLaboratory for Optical and Computational Instrumentation (LOCI), Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA.
Mikhail E KandelQuantitative Light Imaging (QLI) Lab, Department of Electrical and Computer Engineering, Beckman Institute of Advanced Science and Technology, University of Illinois at Urbana Champaign, 405 N. Matthews, Urbana, IL, 61801, USA.ORCID http://orcid.org/0000-0003-2124-7750
Tan H NguyenBiomedical Optical Imaging and Biophotonics group, Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
Yuming LiuLaboratory for Optical and Computational Instrumentation (LOCI), Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA.
Andre Kajdacsy-BallaDepartment of Pathology, University of Illinois at Chicago, 840 South Wood Street, Suite 130 CSN, Chicago, IL, 60612, USA.
Krishnarao TangellaChristie Clinic, 1400 West Park Street, Urbana, IL, 61801, USA.
Kevin W EliceiriLaboratory for Optical and Computational Instrumentation (LOCI), Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA.
Gabriel PopescuQuantitative Light Imaging (QLI) Lab, Department of Bioengineering, Beckman Institute of Advanced Science and Technology, University of Illinois at Urbana Champaign, 405 N. Matthews, Urbana, IL, 61801, USA. gpopescu@illinois.edu.ORCID http://orcid.org/0000-0002-8296-8095
University of Illinois Urbana-Champaign · USUniversity of Wisconsin–Madison · USMassachusetts Institute of Technology · USUniversity of Illinois Chicago · USUrbana University · US

Funding

Quantitative histopathology for cancer prognosis using quantitative phase imaging on stained tissuesR01CA238191 · NCI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI ANASTASIO, MARK A, ELICEIRI, KEVIN WILLIAM · 2019 to 2023
$3.1M
Quantitative assessment of the role of collagen alterations in ovarian cancerR01CA206561 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI CAMPAGNOLA, PAUL J, ELICEIRI, KEVIN WILLIAM · 2016 to 2020
$2.1M
NCI NIH HHS R01 CA206561NCI NIH HHS R01 CA238191
6 · The paper itself

Abstract

Tissue biopsy evaluation in the clinic is in need of quantitative disease markers for diagnosis and, most importantly, prognosis. Among the new technologies, quantitative phase imaging (QPI) has demonstrated promise for histopathology because it reveals intrinsic tissue nanoarchitecture through the refractive index. However, a vast majority of past QPI investigations have relied on imaging unstained tissues, which disrupts the established specimen processing. Here we present color spatial light interference microscopy (cSLIM) as a new whole-slide imaging modality that performs interferometric imaging on stained tissue, with a color detector array. As a result, cSLIM yields in a single scan both the intrinsic tissue phase map and the standard color bright-field image, familiar to the pathologist. Our results on 196 breast cancer patients indicate that cSLIM can provide stain-independent prognostic information from the alignment of collagen fibers in the tumor microenvironment. The effects of staining on the tissue phase maps were corrected by a mathematical normalization. These characteristics are likely to reduce barriers to clinical translation for the new cSLIM technology.

Indexed as

BiopsyBreastBreast NeoplasmsCollagenColoring AgentsDisease-Free SurvivalFemaleHumansMicroscopy, InterferencePrognosisStaining and LabelingTumor MicroenvironmentCollagenColoring Agents

Identifiers

PMID31604963
PMCPMC6789107
OpenAlexW2808156075

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.