Evidence map›Paper›PMID 31604921›Full record

ArticleNature communications2019

Characterization of transgenic mouse models targeting neuromodulatory systems reveals organizational principles of the dorsal raphe.

Daniel F Cardozo Pinto, Hongbin Yang, Iskra Pollak Dorocic, Johannes W de Jong, Vivian J Han, James R Peck, Yichen Zhu, Christine Liu, Kevin T Beier, Marten P Smidt and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Dorsal Raphe VIP Neurons Are Critical for Survival-Oriented Vigilance.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  5. 5-HTMolecular psychiatry · 2025
    Article
  6. Article
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  8. Serotonergic Input into the Cerebellar Cortex Modulates Anxiety-Like Behavior.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  9. Article
  10. Article
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  12. Article
  13. Article
  14. Article
  15. Article
  16. Dorsal raphe dopaminergic neurons target CaMKIITranslational psychiatry · 2024
    Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Daniel F Cardozo PintoDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, 94720, USA.ORCID http://orcid.org/0000-0002-6104-4643
Hongbin YangDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, 94720, USA.
Iskra Pollak DorocicDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, 94720, USA.
Johannes W de JongDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, 94720, USA.ORCID http://orcid.org/0000-0002-0788-9282
Vivian J HanDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, 94720, USA.
James R PeckDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, 94720, USA.
Yichen ZhuDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, 94720, USA.
Christine LiuDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, 94720, USA.
Kevin T BeierDepartments of Physiology and Biophysics, Center for the Neurobiology of Learning and Memory, University of California Irvine, Irvine, CA, 92697, USA.
Marten P SmidtSwammerdam Institute for Life Sciences, FNWI University of Amsterdam, Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0002-8815-747X
Stephan LammelDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, 94720, USA. lammel@berkeley.edu.ORCID http://orcid.org/0000-0002-3350-3208
University of California, Berkeley · USUniversity of Amsterdam · NLUniversity of California, Irvine · US

Funding

Input-specific mechanisms of drug-evoked synaptic plasticity in the ventral tegmental areaR01DA042889 · NIDA · UNIVERSITY OF CALIFORNIA BERKELEY · PI Stephan Lammel · 2017 to 2026
$4.0M
A multi-level investigation into the effects of chronic stress on lateral habenula circuitryR01MH112721 · NIMH · UNIVERSITY OF CALIFORNIA BERKELEY · PI LAMMEL, STEPHAN · 2017 to 2021
$1.9M
INVESTIGATING FUNCTION OF NOVEL DRUG-INDUCED SYNAPTIC CHANGES IN THE VTAR00DA041445 · NIDA · UNIVERSITY OF CALIFORNIA-IRVINE · PI BEIER, KEVIN T · 2018 to 2020
$747k
NIDA NIH HHS R00 DA041445NIDA NIH HHS R01 DA042889NIMH NIH HHS R01 MH112721
6 · The paper itself

Abstract

The dorsal raphe (DR) is a heterogeneous nucleus containing dopamine (DA), serotonin (5HT), γ-aminobutyric acid (GABA) and glutamate neurons. Consequently, investigations of DR circuitry require Cre-driver lines that restrict transgene expression to precisely defined cell populations. Here, we present a systematic evaluation of mouse lines targeting neuromodulatory cells in the DR. We find substantial differences in specificity between lines targeting DA neurons, and in penetrance between lines targeting 5HT neurons. Using these tools to map DR circuits, we show that populations of neurochemically distinct DR neurons are arranged in a stereotyped topographical pattern, send divergent projections to amygdala subnuclei, and differ in their presynaptic inputs. Importantly, targeting DR DA neurons using different mouse lines yielded both structural and functional differences in the neural circuits accessed. These results provide a refined model of DR organization and support a comparative, case-by-case evaluation of the suitability of transgenic tools for any experimental application.

Indexed as

Models, AnimalAnimalsDopaminergic NeuronsDorsal Raphe NucleusMiceMice, TransgenicNeural PathwaysNeurotransmitter AgentsSerotonergic NeuronsSerotonin Plasma Membrane Transport ProteinsNeurotransmitter AgentsSerotonin Plasma Membrane Transport Proteins

Identifiers

PMID31604921
PMCPMC6789139
OpenAlexW2980217275

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.