Evidence map›Paper›PMID 31604778›Full record

ArticleCold Spring Harbor molecular case studies2019

Enrichment of heterozygous germline

Jamie L Maciaszek, Ninad Oak, Wenan Chen, Kayla V Hamilton, Rose B McGee, Regina Nuccio, Roya Mostafavi, Stacy Hines-Dowell, Lynn Harrison, Leslie Taylor and 19 more

Open access · diamondAbstract read
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. RecQ Helicase Somatic Alterations in Cancer.Frontiers in molecular biosciences · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 1 institution in 1 country.

Jamie L MaciaszekDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.ORCID 0000-0002-9217-5638
Ninad OakDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.ORCID 0000-0002-9806-0217
Wenan ChenDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Kayla V HamiltonDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.ORCID 0000-0002-5196-370X
Rose B McGeeDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.ORCID 0000-0001-7392-6515
Regina NuccioDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Roya MostafaviDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Stacy Hines-DowellDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Lynn HarrisonDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Leslie TaylorDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Elsie L GerhardtDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Annastasia OumaDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Michael N EdmonsonDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Aman PatelDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Joy NakitandweDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Alberto S PappoDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Elizabeth M AzzatoDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Sheila A ShurtleffDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
David W EllisonDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
James R DowningDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Melissa M HudsonDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.ORCID 0000-0001-6984-2407
Leslie L RobisonDepartment of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Victor SantanaDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Scott NewmanDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.ORCID 0000-0001-9309-4752
Jinghui ZhangDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Zhaoming WangDepartment of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Gang WuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Kim E Nichols *Department of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.ORCID 0000-0002-5581-6555
Chimene A Kesserwan *Department of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.ORCID 0000-0001-6043-2065
St. Jude Children's Research Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Patients harboring germline pathogenic biallelic variants in genes involved in the recognition and repair of DNA damage are known to have a substantially increased cancer risk. Emerging evidence suggests that individuals harboring heterozygous variants in these same genes may also be at heightened, albeit lesser, risk for cancer. Herein, we sought to determine whether heterozygous variants in

Indexed as

AdolescentChildFemaleGerm CellsHumansLoss of Function MutationLoss of HeterozygosityMaleMutationOsteosarcomaPedigreeRecQ HelicasesRecQ HelicasesRECQL4 protein, humancraniopharyngiomaHodgkin lymphomaosteosarcomapre-B-cell acute lymphoblastic leukemiaT-cell acute lymphoblastic leukemias

Identifiers

PMID31604778
PMCPMC6824257
OpenAlexW2979293021

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.