Evidence map›Paper›PMID 31604426›Full record

ArticleBMC plant biology2019

Genomic changes and biochemical alterations of seed protein and oil content in a subset of fast neutron induced soybean mutants.

Nazrul Islam, Robert M Stupar, Song Qijian, Devanand L Luthria, Wesley Garrett, Adrian O Stec, Jeff Roessler, Savithiry S Natarajan

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Genetic mapping and functional genomics of soybean seed protein.Molecular breeding : new strategies in plant improvement · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Nazrul IslamSoybean Genomics and Improvement Laboratory, USDA-ARS, NEA, 10300, Baltimore Avenue, Beltsville, MD, USA.
Robert M StuparDepartment of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN, USA.
Song QijianSoybean Genomics and Improvement Laboratory, USDA-ARS, NEA, 10300, Baltimore Avenue, Beltsville, MD, USA.
Devanand L LuthriaFood Composition and Methods Development Laboratory, USDA-ARS, NEA, Beltsville, MD, USA.
Wesley GarrettAnimal Biosciences & Biotechnology Laboratory, USDA-ARS, NEA, Beltsville, MD, USA.
Adrian O StecDepartment of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN, USA.
Jeff RoesslerDepartment of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN, USA.
Savithiry S NatarajanSoybean Genomics and Improvement Laboratory, USDA-ARS, NEA, 10300, Baltimore Avenue, Beltsville, MD, USA. savi.natarajan@ars.usda.gov.
Agricultural Research Service · USUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSoybean is subjected to genetic manipulation by breeding, mutation, and transgenic approaches to produce value-added quality traits. Among those genetic approaches, mutagenesis through fast neutrons radiation is intriguing because it yields a variety of mutations, including single/multiple gene deletions and/or duplications. Characterizing the seed composition of the fast neutron mutants and its relationship with gene mutation is useful towards understanding oil and protein traits in soybean.

resultsFrom a large population of fast neutron mutagenized plants, we selected ten mutants based on a screening of total oil and protein content using near infra-red spectroscopy. These ten mutants were regrown, and the seeds were analyzed for oil by GC-MS, protein profiling by SDS-PAGE and gene mapping by comparative genomic hybridization. The mutant 2R29C14Cladecr233cMN15 (nicknamed in this study as L10) showed higher protein and lower oil content compared to the wild type, followed by three other lines (nicknamed in this study as L03, L05, and L06). We characterized the fatty acid methyl esters profile of the trans-esterified oil and found the presence of five major fatty acids (palmitic, stearic, oleic, linoleic, and linolenic acids) at varying proportions among the mutants. Protein profile using SDS-PAGE of the ten mutants did exhibit discernable variation between storage (glycinin and β-conglycinin) and anti-nutritional factor (trypsin inhibitor) proteins. In addition, we physically mapped the position of the gene deletions or duplications in each mutant using comparative genomic hybridization.

conclusionCharacterization of oil and protein profile in soybean fast neutron mutants will assist scientist and breeders to develop new value-added soybeans with improved protein and oil quality traits.

Indexed as

Fast NeutronsGlycine maxMutagenesisMutationPlant OilsPlant ProteinsSeedsPlant OilsPlant ProteinsComparative genomic hybridizationFatty acidsGene deletionMutantsOilProteinProteinsSoybeans

Identifiers

PMID31604426
PMCPMC6790046
OpenAlexW2979954979

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.