Evidence map›Paper›PMID 31603050›Full record

ArticleEmerging microbes & infections2019

Novel reassortant of H1N1 swine influenza virus detected in pig population in Russia.

Ivan Sobolev, Olga Kurskaya, Sergey Leonov, Marsel Kabilov, Tatyana Alikina, Alexander Alekseev, Yuriy Yushkov, Takehiko Saito, Yuko Uchida, Junki Mine and 2 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Emerging microbes & infections, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Ivan SobolevDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine , Novosibirsk , Russia.ORCID https://orcid.org/0000-0002-4561-6517
Olga KurskayaDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine , Novosibirsk , Russia.
Sergey LeonovSiberian Federal Scientific Centre of Agro- BioTechnologies , Krasnoobsk , Russia.
Marsel KabilovInstitute of Chemical Biology and Fundamental Medicine , Novosibirsk , Russia.ORCID https://orcid.org/0000-0003-2777-0833
Tatyana AlikinaInstitute of Chemical Biology and Fundamental Medicine , Novosibirsk , Russia.
Alexander AlekseevDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine , Novosibirsk , Russia.
Yuriy YushkovSiberian Federal Scientific Centre of Agro- BioTechnologies , Krasnoobsk , Russia.
Takehiko SaitoDivision of Transboundary Animal Disease, National Institute of Animal Health , Tsukuba , Japan.
Yuko UchidaDivision of Transboundary Animal Disease, National Institute of Animal Health , Tsukuba , Japan.ORCID https://orcid.org/0000-0002-5833-5917
Junki MineDivision of Transboundary Animal Disease, National Institute of Animal Health , Tsukuba , Japan.
Alexander ShestopalovDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine , Novosibirsk , Russia.
Kirill SharshovDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine , Novosibirsk , Russia.
Federal Research Center of Fundamental and Translational Medicine · RUNational Institute of Animal Health · JPInstitute of Chemical Biology and Fundamental Medicine · RUSiberian Research Institute of Agriculture and Peat · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pigs play an important role in interspecies transmission of the influenza virus, particularly as "mixing vessels" for reassortment. Two influenza A/H1N1 virus strains, A/swine/Siberia/1sw/2016 and A/swine/Siberia/4sw/2017, were isolated during a surveillance of pigs from private farms in Russia from 2016 to 2017. There was a 10% identity difference between the HA and NA nucleotide sequences of isolated strains and the most phylogenetically related sequences (human influenza viruses of 1980s). Simultaneously, genome segments encoding internal proteins were found to be phylogenetically related to the A/H1N1pdm09 influenza virus. In addition, two amino acids (129-130) were deleted in the HA of A/swine/Siberia/4sw/2017 compared to that of A/swine/Siberia/1sw/2016 HA.

Indexed as

AnimalsGenome, ViralInfluenza A Virus, H1N1 SubtypeOrthomyxoviridae InfectionsPhylogenyReassortant VirusesRussiaSwineSwine DiseasesH1N1influenzaphylogenyreassortantSwine

Identifiers

PMID31603050
PMCPMC6818105
OpenAlexW2980058783

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.