Evidence map›Paper›PMID 31601942›Full record

ArticleScientific reports2019

Down-regulation of CK2α correlates with decreased expression levels of DNA replication minichromosome maintenance protein complex (MCM) genes.

Susanne Schaefer, Thomas K Doktor, Sabrina B Frederiksen, Kathleen Chea, Mirka Hlavacova, Gitte H Bruun, Maj Rabjerg, Brage S Andresen, Isabel Dominguez, Barbara Guerra

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Susanne SchaeferDepartment of Biochemistry and Molecular Biology and the Villum Center for Bioanalytical Sciences, University of Southern Denmark, Odense, Denmark.
Thomas K DoktorDepartment of Biochemistry and Molecular Biology and the Villum Center for Bioanalytical Sciences, University of Southern Denmark, Odense, Denmark.
Sabrina B FrederiksenDepartment of Biochemistry and Molecular Biology and the Villum Center for Bioanalytical Sciences, University of Southern Denmark, Odense, Denmark.
Kathleen CheaDepartment of Medicine, Boston University School of Medicine, Boston, 02118, MA, USA.
Mirka HlavacovaDepartment of Medicine, Boston University School of Medicine, Boston, 02118, MA, USA.
Gitte H BruunDepartment of Biochemistry and Molecular Biology and the Villum Center for Bioanalytical Sciences, University of Southern Denmark, Odense, Denmark.
Maj RabjergDepartment of Pathology, Aalborg University Hospital, Aalborg, Denmark.
Brage S AndresenDepartment of Biochemistry and Molecular Biology and the Villum Center for Bioanalytical Sciences, University of Southern Denmark, Odense, Denmark.ORCID http://orcid.org/0000-0001-7488-3035
Isabel DominguezDepartment of Medicine, Boston University School of Medicine, Boston, 02118, MA, USA.ORCID http://orcid.org/0000-0001-9617-4141
Barbara GuerraDepartment of Biochemistry and Molecular Biology and the Villum Center for Bioanalytical Sciences, University of Southern Denmark, Odense, Denmark. bag@bmb.sdu.dk.
University of Southern Denmark · DKBoston University · USAalborg University Hospital · DK

Funding

Boston University Clinical and Translational Science Award (CTSA) Program UL1UL1TR000157 · NCATS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CENTER, DAVID M. · 2012 to 2013
$7.9M
Vascular Biology ResearchT32HL007355 · NHLBI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI MCNAMARA, COLEEN A · 1985 to 2009
$2.6M
Control of embryonic development by CK2: CK2 as a core Wnt/beta-catenin componentR01GM098367 · NIGMS · BOSTON MEDICAL CENTER · PI DOMINGUEZ, MARIA ISABEL · 2011 to 2014
$1.3M
NCATS NIH HHS UL1 TR000157NIGMS NIH HHS R01 GM098367
6 · The paper itself

Abstract

Protein kinase CK2 is a serine/threonine kinase composed of two catalytic subunits (CK2α and/or CK2α') and two regulatory subunits (CK2β). It is implicated in every stage of the cell cycle and in the regulation of various intracellular pathways associated with health and disease states. The catalytic subunits have similar biochemical activity, however, their functions may differ significantly in cells and in vivo. In this regard, homozygous deletion of CK2α leads to embryonic lethality in mid-gestation potentially due to severely impaired cell proliferation. To determine the CK2α-dependent molecular mechanisms that control cell proliferation, we established a myoblast-derived cell line with inducible silencing of CK2α and carried out a comprehensive RNA-Seq analysis of gene expression. We report evidence that CK2α depletion causes delayed cell cycle progression through the S-phase and defective response to replication stress. Differential gene expression analysis revealed that the down-regulated genes were enriched in pathways implicated in cell cycle regulation, DNA replication and DNA damage repair. Interestingly, the genes coding for the minichromosome maintenance proteins (MCMs), which constitute the core of the replication origin recognition complex, were among the most significantly down-regulated genes. These findings were validated in cells and whole mouse embryos. Taken together, our study provides new evidence for a critical role of protein kinase CK2 in controlling DNA replication initiation and the expression levels of replicative DNA helicases, which ensure maintenance of proliferative potential and genome integrity in eukaryotic cells.

Indexed as

DNA ReplicationDown-RegulationAnimalsCasein Kinase IICatalytic DomainCell CycleCell LineCell ProliferationDisease ProgressionDNA DamageFemaleGene DeletionGene Expression Regulation, EnzymologicHomozygoteHumansMaleCasein Kinase IICSNK2A1 protein, humanMinichromosome Maintenance Proteins

Identifiers

PMID31601942
PMCPMC6787000
OpenAlexW2980288928

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.