Evidence map›Paper›PMID 31601739›Full record

ArticleScience (New York, N.Y.)2019

The forebrain synaptic transcriptome is organized by clocks but its proteome is driven by sleep.

Sara B Noya, David Colameo, Franziska Brüning, Andrea Spinnler, Dennis Mircsof, Lennart Opitz, Matthias Mann, Shiva K Tyagarajan, Maria S Robles, Steven A Brown

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Science (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 140 papers.

0numbers the graph read from it
0cells of the map it votes in
140citing papers in PubMed
13.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

140 citing papers in PubMed, 266 citations in OpenAlex.

  1. Article
  2. Review
  3. Circadian Behavioral and Bioluminescence Rhythms in theJournal of biological rhythms · 2026
    Article
  4. Review
  5. Active zone plasticity couples sleep need to presynaptic hypophosphorylation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Review
  7. eLife · 2026
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

80 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Sara B NoyaInstitute of Pharmacology and Toxicology, University of Zürich, Zurich, Switzerland.ORCID 0000-0002-4830-0411
David ColameoInstitute of Pharmacology and Toxicology, University of Zürich, Zurich, Switzerland.ORCID 0000-0001-8432-9396
Franziska BrüningInstitute of Medical Psychology, Medical Faculty, LMU Munich, Germany.ORCID 0000-0002-4169-0744
Andrea SpinnlerInstitute of Pharmacology and Toxicology, University of Zürich, Zurich, Switzerland.ORCID 0000-0002-5216-4416
Dennis MircsofInstitute of Pharmacology and Toxicology, University of Zürich, Zurich, Switzerland.
Lennart OpitzFunctional Genomics Center Zurich, University of Zurich-Eidgenosissche Technische Hochschule, Zurich, Switzerland.
Matthias MannDepartment of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany.ORCID 0000-0003-1292-4799
Shiva K TyagarajanInstitute of Pharmacology and Toxicology, University of Zürich, Zurich, Switzerland. steven.brown@pharma.uzh.ch charo.robles@med.uni-muenchen.de tyagarajan@pharma.uzh.ch.ORCID 0000-0003-0074-1805
Maria S RoblesInstitute of Medical Psychology, Medical Faculty, LMU Munich, Germany. steven.brown@pharma.uzh.ch charo.robles@med.uni-muenchen.de tyagarajan@pharma.uzh.ch.ORCID 0000-0001-9149-8761
Steven A BrownInstitute of Pharmacology and Toxicology, University of Zürich, Zurich, Switzerland. steven.brown@pharma.uzh.ch charo.robles@med.uni-muenchen.de tyagarajan@pharma.uzh.ch.ORCID 0000-0001-5511-568X
University of Zurich · CHBoard of the Swiss Federal Institutes of Technology · CHLudwig-Maximilians-Universität München · DEMax Planck Institute of Biochemistry · DEUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neurons have adapted mechanisms to traffic RNA and protein into distant dendritic and axonal arbors. Taking a biochemical approach, we reveal that forebrain synaptic transcript accumulation shows overwhelmingly daily rhythms, with two-thirds of synaptic transcripts showing time-of-day-dependent abundance independent of oscillations in the soma. These transcripts formed two sharp temporal and functional clusters, with transcripts preceding dawn related to metabolism and translation and those anticipating dusk related to synaptic transmission. Characterization of the synaptic proteome around the clock demonstrates the functional relevance of temporal gating for synaptic processes and energy homeostasis. Unexpectedly, sleep deprivation completely abolished proteome but not transcript oscillations. Altogether, the emerging picture is one of a circadian anticipation of messenger RNA needs in the synapse followed by translation as demanded by sleep-wake cycles.

Indexed as

ProteomeSleepTranscriptomeAnimalsCircadian ClocksCircadian RhythmMaleMiceMice, Inbred C57BLProsencephalonRNA, MessengerSynapsesProteomeRNA, Messenger

Identifiers

PMID31601739
OpenAlexW2980039635

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.