Evidence map›Paper›PMID 31601213›Full record

ArticleBMC biology2019

Transcriptomic and functional analysis of the oosome, a unique form of germ plasm in the wasp Nasonia vitripennis.

Honghu Quan, Deanna Arsala, Jeremy A Lynch

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
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  7. Molecular characterization of eliminated chromosomes in Hessian fly (Mayetiola destructor (Say)).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Honghu QuanDepartment of Pathology and Department of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Deanna ArsalaDepartment of Biological Sciences, University of Illinois at Chicago, Chicago, IL, 60607, USA.
Jeremy A LynchDepartment of Biological Sciences, University of Illinois at Chicago, Chicago, IL, 60607, USA. jlynch42@uic.edu.ORCID 0000-0001-7625-657X
University of Illinois Chicago · USSt. Jude Children's Research Hospital · US

Funding

Novel insights from a divergent form of germ plasmR01GM129153 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI ARKOV, ALEXEY, LYNCH, JEREMY · 2019 to 2023
$1.7M
Discovering the basis of the essential function of DNMT1 in wasp embryogenesisR03HD087476 · NICHD · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LYNCH, JEREMY · 2016 to 2017
$157k
"Characterization of the germ plasm of the WASP Nasonic Vitripennis"R03HD078578 · NICHD · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LYNCH, JEREMY · 2013 to 2014
$154k
NICHD NIH HHS R03 HD078578NICHD NIH HHS R03 HD087476NIGMS NIH HHS R01 GM129153
6 · The paper itself

Abstract

backgroundThe oosome is the germline determinant in the wasp Nasonia vitripennis and is homologous to the polar granules of Drosophila. Despite a common evolutionary origin and developmental role, the oosome is morphologically quite distinct from polar granules. It is a solid sphere that migrates within the cytoplasm before budding out and forming pole cells.

resultsTo gain an understanding of both the molecular basis of oosome development and the conserved essential features of germ plasm, we quantified and compared transcript levels between embryo fragments that contained the oosome and those that did not. The identity of the differentially localized transcripts indicated that Nasonia uses a distinct set of molecules to carry out conserved germ plasm functions. In addition, functional testing of a sample of localized transcripts revealed potentially novel mechanisms of ribonucleoprotein assembly and pole cell cellularization in the wasp.

conclusionsOur results demonstrate that the composition of germ plasm varies significantly within Holometabola, as very few mRNAs share localization to the oosome and polar granules. Some of this variability appears to be related to the unique properties of the oosome relative to the polar granules in Drosophila, and some may be related to differences in pole formation between species. This work will serve as the basis for further investigation into the patterns of germline determinant evolution among insects, the molecular basis of the unique properties of the oosome, and the incorporation of novel components into developmental networks.

Indexed as

AnimalsEmbryo, NonmammalianGerm CellsRNA, MessengerTranscriptomeWaspsRNA, MessengerDrosophilaGermlineGerm plasmNasoniaOosomePrimordial germ cellsRNA interferenceRNAseq

Identifiers

PMID31601213
PMCPMC6785909
OpenAlexW2979978742

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.