Evidence map›Paper›PMID 31601098›Full record

ArticleAnalytical chemistry2019

Label-Free Estimation of Therapeutic Efficacy on 3D Cancer Spheres Using Convolutional Neural Network Image Analysis.

Zhixiong Zhang, Lili Chen, Yimin Wang, Tiantian Zhang, Yu-Chih Chen, Euisik Yoon

Abstract read
In one paragraph

Article in Analytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zhixiong ZhangDepartment of Electrical Engineering and Computer Science , University of Michigan , 1301 Beal Avenue , Ann Arbor , Michigan 48109-2122 , United States.
Lili ChenDepartment of Electrical Engineering and Computer Science , University of Michigan , 1301 Beal Avenue , Ann Arbor , Michigan 48109-2122 , United States.
Yimin WangDepartment of Electrical Engineering and Computer Science , University of Michigan , 1301 Beal Avenue , Ann Arbor , Michigan 48109-2122 , United States.
Tiantian ZhangDepartment of Electrical Engineering and Computer Science , University of Michigan , 1301 Beal Avenue , Ann Arbor , Michigan 48109-2122 , United States.
Yu-Chih ChenDepartment of Electrical Engineering and Computer Science , University of Michigan , 1301 Beal Avenue , Ann Arbor , Michigan 48109-2122 , United States.ORCID 0000-0002-3875-4671
Euisik YoonDepartment of Electrical Engineering and Computer Science , University of Michigan , 1301 Beal Avenue , Ann Arbor , Michigan 48109-2122 , United States.

Funding

Using Microfluidic Single Cell Culture to Characterize Cancer Cell Asymmetric DivisionR01CA203810 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BUCKANOVICH, RONALD J, YOON, EUISIK · 2017 to 2020
$1.6M
Engineered Microenvironments to Study Heterogeneity and Stemness in Breast CancerR21CA195016 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI YOON, EUISIK · 2016 to 2017
$354k
Single Cell to Spheres in High-Throughput Microfluidics for Cancer Drug ScreeningR21CA175857 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI YOON, EUISIK · 2013 to 2014
$333k
NCI NIH HHS R01 CA203810NCI NIH HHS R21 CA175857NCI NIH HHS R21 CA195016
6 · The paper itself

Abstract

Despite recent advances in cancer treatment, developing better therapeutic reagents remains an essential task for oncologists. To accurately characterize drug efficacy, 3D cell culture holds great promise as opposed to conventional 2D monolayer culture. Due to the advantages of cell manipulation in high-throughput, various microfluidic platforms have been developed for drug screening with 3D models. However, the dissemination of microfluidic technology is overall slow, and one missing part is fast and low-cost assay readout. In this work, we developed a microfluidic chip forming 1920 tumor spheres for drug testing, and the platform is supported by automatic image collection and cropping for analysis. Using conventional LIVE/DEAD staining as the ground truth of sphere viability, we trained a convolutional neural network to estimate sphere viability based on its bright-field image. The estimated sphere viability was highly correlated with the ground truth (

Indexed as

Image Processing, Computer-AssistedMicrofluidic Analytical TechniquesNeural Networks, ComputerOptical ImagingAntibiotics, AntineoplasticBreast NeoplasmsCell ProliferationCell SurvivalDose-Response Relationship, DrugDoxorubicinDrug Screening Assays, AntitumorEquipment DesignHumansStructure-Activity RelationshipTumor Cells, CulturedAntibiotics, AntineoplasticDoxorubicin

Identifiers

PMID31601098
PMCPMC13134704

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.