Evidence map›Paper›PMID 31600783›Full record

ArticleHuman molecular genetics2020

Single-nucleotide polymorphisms in Orai1 associated with atopic dermatitis inhibit protein turnover, decrease calcium entry and disrupt calcium-dependent gene expression.

Yi-Chun Yeh, Yu-Ping Lin, Holger Kramer, Anant B Parekh

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. International journal of molecular sciences · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Store-operated calcium channels in skin.Frontiers in physiology · 2022
    Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Orai channels: key players in CaCurrent opinion in physiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yi-Chun YehDepartment of Physiology, Anatomy and Genetics, Parks Road, Oxford, OX1 3PT UK.
Yu-Ping LinDepartment of Physiology, Anatomy and Genetics, Parks Road, Oxford, OX1 3PT UK.
Holger KramerMRC London Institute of Medical Sciences, Imperial College London, UK.
Anant B ParekhDepartment of Physiology, Anatomy and Genetics, Parks Road, Oxford, OX1 3PT UK.
MRC London Institute of Medical Sciences · GB

Funding

Medical Research Council MR/L01047X/1
6 · The paper itself

Abstract

Loss-of function mutations in Orai1 Ca2+ channels lead to a form of severe combined immunodeficiency, auto-immunity, muscle hypotonia and defects in dental enamel production and sweat gland function. Two single-nucleotide polymorphisms (SNPs) in Orai1 have been found and localize to the second extracellular loop. These polymorphisms associate with atopic dermatitis but how they affect Ca2+ signalling and cell function is unknown. Here, we find that Orai1-SNPs turnover considerably more slowly than wild type Orai1 and are more abundantly expressed in the plasma membrane. We show a central role for flotillin in the endocytotic recycling of Orai1 channels and that endocytosed wild type Orai1 is trafficked to Rab 7-positive late endosomes for lysosomal degradation. Orai1-SNPs escape the degradation pathway and instead enter Rab 11-positive recycling endosomes, where they are returned to the surface membrane through Arf6-dependent exocytosis. We find that Orai1-SNPs escape late endosomes through endosomal pH regulation of interaction between the channel and flotillin. We identify a pH-sensitive electrostatic interaction between positively charged arginine in extracellular loop 2 (K210) and a negatively charged aspartate (D112) in extracellular loop 1 that helps determine Orai1 turnover. The increase in membrane Orai1-SNP leads to a mis-match in Orai1-STIM stoichiometry, resulting in inhibition of Ca2+ entry and Ca2+-dependent gene expression. Our results identify new strategies for targeting atopic dermatitis.

Indexed as

CalciumCalcium SignalingCell MembraneDermatitis, AtopicEndosomesGene Expression RegulationHEK293 CellsHumansLysosomesMembrane ProteinsORAI1 ProteinPolymorphism, Single NucleotideProteolysisrab7 GTP-Binding Proteinsrab GTP-Binding ProteinsCalciumflotillinsMembrane ProteinsORAI1 Proteinrab7 GTP-Binding Proteinsrab GTP-Binding Proteins

Identifiers

PMID31600783
PMCPMC7372555
OpenAlexW2979822984

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.