Evidence map›Paper›PMID 31600062›Full record

ArticleACS synthetic biology2019

Repurposing Protein Degradation for Optogenetic Modulation of Protein Activities.

Payel Mondal, Vishnu V Krishnamurthy, Savanna R Sharum, Neeka Haack, Huiwen Zhou, Jennifer Cheng, Jing Yang, Kai Zhang

Open access · greenAbstract read
In one paragraph

Article in ACS synthetic biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. A light way for nuclear cell biologists.Journal of biochemistry · 2021
    Review
  11. Engineering Photosensory Modules of Non-Opsin-Based Optogenetic Actuators.International journal of molecular sciences · 2020
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Payel Mondal
Vishnu V Krishnamurthy
Savanna R Sharum
Neeka Haack
Huiwen Zhou
Jennifer Cheng
Jing YangDepartment of Comparative Biosciences , University of Illinois at Urbana-Champaign , 2001 S Lincoln Avenue , Urbana , Illinois 61802 , United States.
University of Illinois Urbana-Champaign · US

Funding

Maternal control of germline developmentR35GM131810 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI Jing Yang · 2019 to 2026
$3.2M
Precise regulation of native transcription factor at the single-cell levelR01GM132438 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI ZHANG, KAI · 2019 to 2022
$1.4M
NIGMS NIH HHS R01 GM132438NIGMS NIH HHS R35 GM131810
6 · The paper itself

Abstract

Non-neuronal optogenetic approaches empower precise regulation of protein dynamics in live cells but often require target-specific protein engineering. To address this challenge, we developed a generalizable light-modulated protein stabilization system (GLIMPSe) to control the intracellular protein level independent of its functionality. We applied GLIMPSe to control two distinct classes of proteins: mitogen-activated protein kinase phosphatase 3 (MKP3), a negative regulator of the extracellular signal-regulated kinase (ERK) pathway, and a constitutively active form of MEK (CA MEK), a positive regulator of the same pathway. Kinetics study showed that light-induced protein stabilization could be achieved within 30 min of blue light stimulation. GLIMPSe enables target-independent optogenetic control of protein activities and therefore minimizes the systematic variation embedded within different photoactivatable proteins. Overall, GLIMPSe promises to achieve light-mediated post-translational stabilization of a wide array of target proteins in live cells.

Indexed as

MAP Kinase Signaling SystemAnimalsDual Specificity Phosphatase 6HEK293 CellsHumansKineticsLightLuciferases, FireflyMAP Kinase Kinase KinasesOptogeneticsPC12 CellsProtein EngineeringProtein Processing, Post-TranslationalProtein StabilityProteolysisRatsDual Specificity Phosphatase 6DUSP6 protein, humanLuciferases, FireflyMAP Kinase Kinase KinasesCA MEKdegronGLIMPSeMKP3optogeneticsprotein degradation

Identifiers

PMID31600062
PMCPMC7039648
OpenAlexW2979755538

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.