Evidence map›Paper›PMID 31599077›Full record

ArticleEnvironmental microbiology2020

The Neurospora RNA polymerase II kinase CTK negatively regulates catalase expression in a chromatin context-dependent manner.

Jiabin Duan, Qingqing Liu, Sodgerel Su, Joonseok Cha, Yike Zhou, Ruiqi Tang, Xiao Liu, Ying Wang, Yi Liu, Qun He

Open access · greenAbstract read
In one paragraph

Article in Environmental microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Jiabin DuanState Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Qingqing LiuState Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Sodgerel SuState Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Joonseok ChaDepartment of Physiology, The University of Texas Southwestern Medical Center, Dallas, Texas, 75390, USA.
Yike ZhouState Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Ruiqi TangState Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Xiao LiuState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Ying WangState Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Yi LiuDepartment of Physiology, The University of Texas Southwestern Medical Center, Dallas, Texas, 75390, USA.
Qun HeState Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.ORCID 0000-0002-2629-1673
China Agricultural University · CNThe University of Texas Southwestern Medical Center · USChinese Academy of Sciences · CN

Funding

Mechanisms of Circadian Clock and Gene Sliencing in NeurosporaR35GM118118 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI LIU, YI · 2016 to 2025
$6.3M
CAS Pioneer Hundred Talents Program to X.L.National Natural Science Foundation of China and CAS Pioneer Hundred Talents Program to X.L. 31771383National Natural Science Foundation of China to Q.H. 31771383NIGMS NIH HHS R35 GM118118
6 · The paper itself

Abstract

Clearance and adaptation to reactive oxygen species (ROS) are crucial for cell survival. As in other eukaryotes, the Neurospora catalases are the main enzymes responsible for ROS clearance and their expression are tightly regulated by the growth and environmental conditions. The RNA polymerase II carboxyl terminal domain (RNAPII CTD) kinase complex (CTK complex) is known as a positive elongation factor for many inducible genes by releasing paused RNAPII near the transcription start site and promoting transcription elongation. However, here we show that deletion of CTK complex components in Neurospora led to high CAT-3 expression level and resistance to H

Indexed as

Gene Expression Regulation, FungalCatalaseChromatinFungal ProteinsHistonesNeurosporaPhosphorylationPhosphotransferasesTranscription Initiation SiteCatalaseChromatinFungal ProteinsHistonesPhosphotransferases

Identifiers

PMID31599077
PMCPMC7216558
OpenAlexW2979480498

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.