Evidence map›Paper›PMID 31597782›Full record

ArticleJournal of virology2019

Characterization of Endogenous SERINC5 Protein as Anti-HIV-1 Factor.

Vânia Passos, Thomas Zillinger, Nicoletta Casartelli, Amelie S Wachs, Shuting Xu, Angelina Malassa, Katja Steppich, Hildegard Schilling, Sergej Franz, Daniel Todt and 7 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. SERINC5 counters retroviruses and non-retroviruses.Frontiers in cellular and infection microbiology · 2024
    Review
  6. Article
  7. Article
  8. HIV-1 restriction by SERINC5.Medical microbiology and immunology · 2023
    Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. CoelacanthJournal of virology · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 3 countries.

Vânia Passos *Institute of Experimental Virology, TWINCORE Centre for Experimental and Clinical Infection Research, Hannover, Germany.
Thomas Zillinger *Institute of Clinical Chemistry and Clinical Pharmacology, University Hospital, University of Bonn, Bonn, Germany.
Nicoletta CasartelliInstitut Pasteur, Department of Virology, Virus and Immunity Unit, Paris, France.
Amelie S WachsInstitute of Virology, Hannover Medical School, Hannover, Germany.
Shuting XuInstitute of Experimental Virology, TWINCORE Centre for Experimental and Clinical Infection Research, Hannover, Germany.
Angelina MalassaInstitute of Experimental Virology, TWINCORE Centre for Experimental and Clinical Infection Research, Hannover, Germany.
Katja SteppichInstitute of Experimental Virology, TWINCORE Centre for Experimental and Clinical Infection Research, Hannover, Germany.
Hildegard SchillingInstitute of Clinical Chemistry and Clinical Pharmacology, University Hospital, University of Bonn, Bonn, Germany.
Sergej FranzInstitute of Experimental Virology, TWINCORE Centre for Experimental and Clinical Infection Research, Hannover, Germany.
Daniel TodtDepartment of Molecular and Medical Virology, Ruhr University Bochum, Bochum, Germany.
Eike SteinmannDepartment of Molecular and Medical Virology, Ruhr University Bochum, Bochum, Germany.
Kathrin SutterInstitute for Virology, University Hospital Essen, University of Duisburg-Essen, Essen, Germany.
Ulf DittmerInstitute for Virology, University Hospital Essen, University of Duisburg-Essen, Essen, Germany.
Jens BohneInstitute of Virology, Hannover Medical School, Hannover, Germany.
Olivier SchwartzInstitut Pasteur, Department of Virology, Virus and Immunity Unit, Paris, France.ORCID 0000-0002-0729-1475
Winfried BarchetInstitute of Clinical Chemistry and Clinical Pharmacology, University Hospital, University of Bonn, Bonn, Germany.
Christine GoffinetInstitute of Experimental Virology, TWINCORE Centre for Experimental and Clinical Infection Research, Hannover, Germany christine.goffinet@charite.de.ORCID 0000-0002-3959-004X
Center for Experimental and Clinical Infection Research · DEUniversity of Bonn · DEInstitut Pasteur · FRMedizinische Hochschule Hannover · DERuhr University Bochum · DEUniversity of Duisburg-Essen · DEBerlin Institute of Health at Charité - Universitätsmedizin Berlin · DEUniversidade do Porto · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

When expressed in virus-producing cells, the cellular multipass transmembrane protein SERINC5 reduces the infectivity of HIV-1 particles and is counteracted by HIV-1 Nef. Due to the unavailability of an antibody of sufficient specificity and sensitivity, investigation of SERINC5 protein expression and subcellular localization has been limited to heterologously expressed SERINC5. We generated, via CRISPR/Cas9-assisted gene editing, Jurkat T-cell clones expressing endogenous SERINC5 bearing an extracellularly exposed hemagglutinin (HA) epitope [Jurkat

Indexed as

Anti-HIV AgentsCell LineCell MembraneCRISPR-Cas SystemsGene EditingGene Expression RegulationGene Knockout TechniquesGenotypeHEK293 CellsHIV-1HIV InfectionsHost-Pathogen InteractionsHumansInterferon-alphaMembrane Proteinsnef Gene Products, Human Immunodeficiency VirusAnti-HIV AgentsInterferon-alphaMembrane Proteinsnef Gene Products, Human Immunodeficiency VirusNitrilesPyrazolesPyrimidinesruxolitinibSERINC5 protein, humanantiviral factorCRISPR/Cas9HIV-1human immunodeficiency virusinterferonsNefSERINC5

Identifiers

PMID31597782
PMCPMC6880170
OpenAlexW2977788254

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.