Evidence map›Paper›PMID 31595628›Full record

ArticlePediatric blood & cancer2020

Targeted fusion analysis can aid in the classification and treatment of pediatric glioma, ependymoma, and glioneuronal tumors.

Jessica A Lake, Andrew M Donson, Eric Prince, Kurtis D Davies, Anandani Nellan, Adam L Green, Jean Mulcahy Levy, Kathleen Dorris, Rajeev Vibhakar, Todd C Hankinson and 5 more

Abstract read
In one paragraph

Article in Pediatric blood & cancer, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Oncogenic gene fusions in cancer: from biology to therapy.Signal transduction and targeted therapy · 2025
    Review
  6. Article
  7. Signal integrator function of CXXC5 in Cancer.Cell communication and signaling : CCS · 2025
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Paediatric low-grade glioma: the role of classical pathology in integrated diagnostic practice.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2024
    Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Molecular and therapeutic advancements in Capicua (Frontiers in cell and developmental biology · 2024
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Jessica A LakeCenter for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.ORCID 0000-0001-7739-0850
Andrew M DonsonThe Morgan Adams Foundation Pediatric Brain Tumor Research Program, Department of Pediatrics, Center for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.
Eric PrinceDepartment of Neurosurgery, University of Colorado, Aurora, Colorado.
Kurtis D DaviesDepartment of Pathology, University of Colorado, Aurora, Colorado.
Anandani NellanThe Morgan Adams Foundation Pediatric Brain Tumor Research Program, Department of Pediatrics, Center for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.
Adam L GreenThe Morgan Adams Foundation Pediatric Brain Tumor Research Program, Department of Pediatrics, Center for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.ORCID 0000-0002-4469-2358
Jean Mulcahy LevyThe Morgan Adams Foundation Pediatric Brain Tumor Research Program, Department of Pediatrics, Center for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.
Kathleen DorrisThe Morgan Adams Foundation Pediatric Brain Tumor Research Program, Department of Pediatrics, Center for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.
Rajeev VibhakarThe Morgan Adams Foundation Pediatric Brain Tumor Research Program, Department of Pediatrics, Center for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.
Todd C HankinsonThe Morgan Adams Foundation Pediatric Brain Tumor Research Program, Department of Pediatrics, Center for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.
Nicholas K ForemanThe Morgan Adams Foundation Pediatric Brain Tumor Research Program, Department of Pediatrics, Center for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.
Mark D EwaltDepartment of Pathology, University of Colorado, Aurora, Colorado.
Bette K Kleinschmidt-DeMastersDepartments of Pathology, Neurology, Neurosurgery, University of Colorado, Aurora, Colorado.ORCID 0000-0002-4471-1678
Lindsey M HoffmanThe Morgan Adams Foundation Pediatric Brain Tumor Research Program, Department of Pediatrics, Center for Cancer and Blood Disorders, Children's Hospital Colorado, Aurora, Colorado.
Ahmed GilaniDepartment of Pathology, Children's Hospital Colorado, University of Colorado, Aurora, Colorado.

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
NCI NIH HHS P30 CA046934NCI NIH HHS P30-CA046934
6 · The paper itself

Abstract

backgroundThe use of next-generation sequencing for fusion identification is being increasingly applied and aids our understanding of tumor biology. Some fusions are responsive to approved targeted agents, while others have future potential for therapeutic targeting. Although some pediatric central nervous system tumors may be cured with surgery alone, many require adjuvant therapy associated with acute and long-term toxicities. Identification of targetable fusions can shift the treatment paradigm toward earlier integration of molecularly targeted agents.

methodsPatients diagnosed with glial, glioneuronal, and ependymal tumors between 2002 and 2019 were retrospectively reviewed for fusion testing. Testing was done primarily using the ArcherDx FusionPlex Solid Tumor panel, which assesses fusions in 53 genes. In contrast to many previously published series chronicling fusions in pediatric patients, we compared histological features and the tumor classification subtype with the specific fusion identified.

resultsWe report 24 cases of glial, glioneuronal, or ependymal tumors from pediatric patients with identified fusions. With the exception of BRAF:KIAA1549 and pilocytic/pilomyxoid astrocytoma morphology, and possibly QKI-MYB and angiocentric glioma, there was not a strong correlation between histological features/tumor subtype and the specific fusion. We report the unusual fusions of PPP1CB-ALK, CIC-LEUTX, FGFR2-KIAA159, and MN1-CXXC5 and detail their morphological features.

conclusionsFusion testing proved to be informative in a high percentage of cases. A large majority of fusion events in pediatric glial, glioneuronal, and ependymal tumors can be identified by relatively small gene panels.

Indexed as

Biomarkers, TumorBrain NeoplasmsChildChild, PreschoolCombined Modality TherapyEpendymomaFemaleFollow-Up StudiesGliomaHumansInfantMaleNeoplasms, NeuroepithelialOncogene Proteins, FusionPrognosisRetrospective StudiesBiomarkers, TumorOncogene Proteins, FusionCNS tumorsependymomagliomaglioneuronalmolecular fusionpediatric

Identifiers

PMID31595628
PMCPMC7560962

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