Evidence map›Paper›PMID 31594866›Full record

ArticleThe Journal of biological chemistry2019

Neuronal ER-plasma membrane junctions organized by Kv2-VAP pairing recruit Nir proteins and affect phosphoinositide homeostasis.

Michael Kirmiz, Taryn E Gillies, Eamonn J Dickson, James S Trimmer

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Roles of funny HCN.Comparative biochemistry and physiology. Toxicology & pharmacology : CBP · 2025
    Review
  3. Review
  4. Article
  5. The Electrically Silent Kv5.1 Subunit Forms Heteromeric Kv2 Channels in Cortical Neurons and Confers Distinct Functional Properties.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. NPC1-dependent alterations in KNature communications · 2023
    Article
  11. Article
  12. Role of Lysosomal Cholesterol in Regulating PI(4,5)PAdvances in experimental medicine and biology · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Phosphoinositide transport and metabolism at membrane contact sites.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2022
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Michael KirmizDepartment of Neurobiology, Physiology, and Behavior, University of California, Davis, California 95616.
Taryn E GilliesDepartment of Bioengineering, Stanford University, Stanford, California 94305.
Eamonn J DicksonDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, California 95616.
James S TrimmerDepartment of Neurobiology, Physiology, and Behavior, University of California, Davis, California 95616 jtrimmer@ucdavis.edu.ORCID 0000-0002-6117-3912
University of California, Davis · USStanford University · USUniversity of California System · US

Funding

UC Davis MCB T32 Administrative Supplement to Recognize Excellence in Diversity, Equity, Inclusion, and Accessibility (DEIA) MentorshipT32GM007377 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI CHEDIN, FREDERIC LOUIS · 1985 to 2023
$9.9M
Tuning L-Type Ca Channel Activity in Arterial Smooth Muscle by Kv Channel-Mediated ClusteringR01HL144071 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SANTANA, LUIS F, TRIMMER, JAMES S · 2018 to 2021
$2.0M
Membrane contact sites regulate cellular excitabilityR01GM127513 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI DICKSON, EAMONN JAMES · 2019 to 2023
$1.6M
Defining the Proteomic Composition of ER:Plasma Membrane Junctions in Brain NeuronsR21NS101648 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TRIMMER, JAMES S · 2018 to 2019
$348k
NHLBI NIH HHS R01 HL144071NIGMS NIH HHS R01 GM127513NIGMS NIH HHS T32 GM007377NINDS NIH HHS R21 NS101648
6 · The paper itself

Abstract

The association of plasma membrane (PM)-localized voltage-gated potassium (Kv2) channels with endoplasmic reticulum (ER)-localized vesicle-associated membrane protein-associated proteins VAPA and VAPB defines ER-PM junctions in mammalian brain neurons. Here, we used proteomics to identify proteins associated with Kv2/VAP-containing ER-PM junctions. We found that the VAP-interacting membrane-associated phosphatidylinositol (PtdIns) transfer proteins PYK2 N-terminal domain-interacting receptor 2 (Nir2) and Nir3 specifically associate with Kv2.1 complexes. When coexpressed with Kv2.1 and VAPA in HEK293T cells, Nir2 colocalized with cell-surface-conducting and -nonconducting Kv2.1 isoforms. This was enhanced by muscarinic-mediated PtdIns(4,5)P

Indexed as

AnimalsBrainCalcium-Binding ProteinsCell MembraneEndoplasmic ReticulumEye ProteinsHEK293 CellsHippocampusHomeostasisHumansKineticsMembrane ProteinsMembrane Transport ProteinsMiceMice, KnockoutNeuronsCalcium-Binding ProteinsEye ProteinsKcnb1 protein, mouseMembrane ProteinsMembrane Transport ProteinsPhosphatidic AcidsPhosphatidylinositolsPhospholipid Transfer ProteinsPitpnm2 protein, mousePitpnm protein, mouseReceptors, MuscarinicShab Potassium ChannelsSirolimusVapa protein, mouseVesicular Transport Proteinsbrainendoplasmic reticulum (ER)lipidsmembrane-associated phosphatidylinositol transfer proteinsmembrane contact site (MCS)membrane proteinneuronorganellephosphatidylinositol signalingplasma membraneplasma membrane junctionpotassium channel

Identifiers

PMID31594866
PMCPMC6879337
OpenAlexW2979560243

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.